| New model in OGS2.0 | DPOGS205890 |
|---|---|
| Genomic Position | scaffold1853:+ 4191-7586 |
| See gene structure | |
| CDS Length | 870 |
| Paired RNAseq reads | 290 |
| Single RNAseq reads | 756 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007021 (5e-117) |
| Best Drosophila hit | Rab40, isoform A (7e-102) |
| Best Human hit | ras-related protein Rab-40C isoform a (1e-85) |
| Best NR hit (blastp) | PREDICTED: similar to Rab40 CG1900-PA, isoform A [Apis mellifera] (1e-114) |
| Best NR hit (blastx) | PREDICTED: similar to Rab40 CG1900-PA, isoform A [Apis mellifera] (1e-110) |
| GeneOntology terms | GO:0003924 GTPase activity GO:0008360 regulation of cell shape GO:0015031 protein transport GO:0005525 GTP binding GO:0007264 small GTPase mediated signal transduction |
| InterPro families | IPR003577 Ras small GTPase, Ras type IPR003579 Ras small GTPase, Rab type IPR003578 Small GTPase, Rho type IPR001496 SOCS protein, C-terminal IPR013753 Ras IPR001806 Ras GTPase IPR005225 Small GTP-binding protein IPR020851 Small GTPase |
| Orthology group | MCL11812 |
Nucleotide sequence:
ATGTTCACCACGACTGGGATGGTAGCAGCACCTCAACAGGCGACAGGTCAAGTCGCACAA
AATGGAAGCACTACCCTGCCGCGGTCTTATCACCAAAGAGCAGGCAGACCACCGGCAGCT
CCAAAATCATATGACTATTTGTTAAAAGTATTGCTTGTGGGTGACTCAGATGTGGGGAAA
CAAGAAATATTACAAGACTTAGAAGATGGCTCTGCTGATTCCCCTTTTTGTAGTGGAAGT
GTATATAAGACCACAACCATCCTCCTTGATGGTAAGCGTGTGAAGTTGCAGCTGTGGGAT
ACATCGGGCCAGGGCCGGTTCTGTACGATCATCAGATCATACTCAAGAGGAGCTCAAGGC
ATCTTACTGGTGTACGATATTACCAACAAGTGGTCCTTTGACAGTATAGATCGCTGGTTG
GAGGAGGTTGAAAAGCATGCACCCGGAGTTCCAAAAGTACTGGTTGGTAACAGGCTTCAT
TTGGCCTTCAAGCGCCAAGTGCAAGAACGTGATGCTGAATTGTATGCAGCCAAGAACCAT
ATGGCCTTCTTTGAAGTGAGCCCGCTGTGTGATTTCAATATACGTGAGAGTTTCTGTGAG
CTATCACGGATGGCACTACATCGGAACGGCATGGAAAGACTGTGGAGAAGCAATAAAGTA
CTAAGTCTCCAAGAGCTGTGCTGTCGAGCGATAGTCGCTCGGACGTCCGTCTACGGCCTC
GAGCGGCTGCCCTTGCCGAGCGCTTTGAAATCACACCTCAAGTCATACGCGATATCCGCC
GCACCCAGCCGCCACCGCGCCCGCCCCTCCAAACACACCCACCACACACGACTCAACTGC
ACTGGCAGGAACTCTTGCTCAATCGCCTGA
Protein sequence:
MFTTTGMVAAPQQATGQVAQNGSTTLPRSYHQRAGRPPAAPKSYDYLLKVLLVGDSDVGK
QEILQDLEDGSADSPFCSGSVYKTTTILLDGKRVKLQLWDTSGQGRFCTIIRSYSRGAQG
ILLVYDITNKWSFDSIDRWLEEVEKHAPGVPKVLVGNRLHLAFKRQVQERDAELYAAKNH
MAFFEVSPLCDFNIRESFCELSRMALHRNGMERLWRSNKVLSLQELCCRAIVARTSVYGL
ERLPLPSALKSHLKSYAISAAPSRHRARPSKHTHHTRLNCTGRNSCSIA