| New model in OGS2.0 | DPOGS201559 |
|---|---|
| Genomic Position | scaffold864:- 80384-81250 |
| See gene structure | |
| CDS Length | 558 |
| Paired RNAseq reads | 58 |
| Single RNAseq reads | 196 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006034 (2e-85) |
| Best Drosophila hit | CG9236 (4e-28) |
| Best Human hit | calcium and integrin-binding protein 1 (6e-35) |
| Best NR hit (blastp) | calcium and integrin binding protein CIB [Bombyx mori] (8e-98) |
| Best NR hit (blastx) | calcium and integrin binding protein CIB [Bombyx mori] (6e-88) |
| GeneOntology terms | GO:0005509 calcium ion binding GO:0005783 endoplasmic reticulum GO:0030175 filopodium GO:0005515 protein binding GO:0006915 apoptosis GO:0007155 cell adhesion GO:0005634 nucleus GO:0006974 response to DNA damage stimulus GO:0005654 nucleoplasm GO:0016020 membrane GO:0016324 apical plasma membrane GO:0005737 cytoplasm GO:0005886 plasma membrane GO:0006302 double-strand break repair |
| InterPro families | IPR018249 EF-HAND 2 IPR018247 EF-Hand 1, calcium-binding site IPR011992 EF-hand-like domain IPR002048 Calcium-binding EF-hand |
| Orthology group | MCL17182 |
Nucleotide sequence:
ATGGGACAAGGTAAAAGTCAGTTCACAGAAGAAGAGCTCCAAGATTATGAAGACCTTACA
TACTTTACCAAGAAAGAAGTGCTTTATGCTCATCAAAAATTTAAGTCTCTAGCTCCAGAA
AAAGTAGGGCACAATAAAAATGCAAAGCTACCGATGGCAAAGATATTACAATACCCAGAG
TTACGAGTCAACCCATTCAGAGACAGAATATGCAAAGTTTTTAGTTCCAGCAATGATGGC
GACTGTACTTTTGAAGATTTTCTTGATATGATGTCTGTATTTTGTGACAATGCACCAAAG
GCTGTCAAAGCTGAACATGCATTTAGAATATTTGATTTCGATGGTGATGACATGATTGGA
GTATCTGATTTACGGGAGGTCATTGAACGTCTCTGTGGCTCCGAGTTGAAGCTGAGTGAC
TCAGAGATACAGCAGTTGGTGCAGAATGTTTTGGAAGAAGCTGATCTCGATGATGACGGA
GCTTTGTCCTTTGCCGAGTTTGAGCATATCATTGATAAAAGTTCTGATTTTTGCCAATCC
TTTCGAATAAGACTATAA
Protein sequence:
MGQGKSQFTEEELQDYEDLTYFTKKEVLYAHQKFKSLAPEKVGHNKNAKLPMAKILQYPE
LRVNPFRDRICKVFSSSNDGDCTFEDFLDMMSVFCDNAPKAVKAEHAFRIFDFDGDDMIG
VSDLREVIERLCGSELKLSDSEIQQLVQNVLEEADLDDDGALSFAEFEHIIDKSSDFCQS
FRIRL