| New model in OGS2.0 | DPOGS215091 |
|---|---|
| Genomic Position | scaffold1700:+ 34808-36733 |
| See gene structure | |
| CDS Length | 1113 |
| Paired RNAseq reads | 571 |
| Single RNAseq reads | 1598 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007193 (4e-163) |
| Best Drosophila hit | decapping protein 2, isoform A (4e-81) |
| Best Human hit | mRNA-decapping enzyme 2 (7e-79) |
| Best NR hit (blastp) | PREDICTED: similar to Decapping protein 2 CG6169-PA [Tribolium castaneum] (3e-105) |
| Best NR hit (blastx) | PREDICTED: similar to Decapping protein 2 CG6169-PA [Tribolium castaneum] (2e-97) |
| GeneOntology terms | GO:0030145 manganese ion binding GO:0003723 RNA binding GO:0016787 hydrolase activity GO:0035195 gene silencing by miRNA GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0000932 cytoplasmic mRNA processing body GO:0000956 nuclear-transcribed mRNA catabolic process |
| InterPro families | IPR015797 NUDIX hydrolase domain-like IPR000086 NUDIX hydrolase domain IPR020084 NUDIX hydrolase, conserved site IPR007722 mRNA decapping protein 2, Box A |
| Orthology group | MCL12164 |
Nucleotide sequence:
ATGGCTTCATCAGAGGGAAATATTCGCCAAAACAAACATTCAATTCCAATTGATATTTTA
GATGATCTTTGCAGTCGTTTTATAATAAATCTGCCGCCTGAAGACAAAGCGAATTTGGTT
CGAATCTGTTTCCAAATAGAATTGGCACATTGGTTTTATCTGGATTACTATTGCACCGAC
GAAAGCACAAGACTCAACCCTTGTGGCATCAGGGAATTTGCAGCACATATATTTCAGCAT
GTCCCTACACTTCGTGAGCATATTAGGAATCTTGATGAGGTTTTGGATAACTGGAGGGAG
TACAAGCAAACTGTTCCAACATATGGTGCCATCCTCCTCGACACTGACTTGACACATGTA
TTGTTAGTGCAGTCATATTGGGCGAAGGCGTCATGGGGTTTCCCTAAAGGCAAGGTCAAT
GAAGATGAGGAACCATGGAAATGTGCTAGTAGAGAGGTGCTAGAAGAAACTGGTTTTGAT
ATAAGCAATCTTATTAATAAACAAGATTATATTGAAGCTACAATTCACGATCAAATCGCT
AGATTGTATATTATAGGGAATATATCACGAGATACAAAGTTTCAACCGCGAACAAGGAAT
GAGATTAAAGCCTGTGAATGGTTTCCAATAGCGGATCTACCAGCGAACAGGAAGGATATG
ACGCCCAAAGTTAAAATGGGGGTCAGTCCGAACGCATTTTTTATGGTGCTACCATTCGTT
AAACGTATACGACGCTGGGTGGCCGAAAGGCATCAAAAAGTCTTCAGGCGCACCCGCCAT
AAGTCAATGGGTGATATAGATATGACTCAAAATAAAAATAAAACTATCTCACAAGGCCTG
CAAAACGAAATTCAGGAGTACCAGCAGAATACCAACCAGAAAGTATACAAGAATCACAGC
GTCACCAAAACGAACGGCAACAGAAAGGCGGGAAAAATGTCCAAACGGCAACTATTCACG
CCGCAGAACGTTCAAACGTTCAATTTCTCGCCTGTGCACAAAGATAATAGTCCGATAGAT
GATGTAGAAGATAACTCGTATTATAACTTCGTGGCGCCATCTTGGGCTAATTTTAAATTT
GACAGACGCGCCATCTTAGACTGTTTGACTTGA
Protein sequence:
MASSEGNIRQNKHSIPIDILDDLCSRFIINLPPEDKANLVRICFQIELAHWFYLDYYCTD
ESTRLNPCGIREFAAHIFQHVPTLREHIRNLDEVLDNWREYKQTVPTYGAILLDTDLTHV
LLVQSYWAKASWGFPKGKVNEDEEPWKCASREVLEETGFDISNLINKQDYIEATIHDQIA
RLYIIGNISRDTKFQPRTRNEIKACEWFPIADLPANRKDMTPKVKMGVSPNAFFMVLPFV
KRIRRWVAERHQKVFRRTRHKSMGDIDMTQNKNKTISQGLQNEIQEYQQNTNQKVYKNHS
VTKTNGNRKAGKMSKRQLFTPQNVQTFNFSPVHKDNSPIDDVEDNSYYNFVAPSWANFKF
DRRAILDCLT