| New model in OGS2.0 | DPOGS214289 |
|---|---|
| Genomic Position | scaffold185:- 64884-67549 |
| See gene structure | |
| CDS Length | 2007 |
| Paired RNAseq reads | 825 |
| Single RNAseq reads | 2166 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006002 (7e-108) |
| Best Drosophila hit | myospheroid (5e-78) |
| Best Human hit | integrin beta-7 precursor (5e-70) |
| Best NR hit (blastp) | integrin beta 1 [Spodoptera frugiperda] (2e-175) |
| Best NR hit (blastx) | integrin beta 1 [Spodoptera frugiperda] (2e-158) |
| GeneOntology terms | GO:0007417 central nervous system development GO:0007517 muscle organ development GO:0008305 integrin complex GO:0007391 dorsal closure GO:0007494 midgut development GO:0016477 cell migration GO:0016203 muscle attachment GO:0016339 calcium-dependent cell-cell adhesion GO:0007157 heterophilic cell-cell adhesion GO:0007160 cell-matrix adhesion GO:0050839 cell adhesion molecule binding GO:0005925 focal adhesion GO:0016340 calcium-dependent cell-matrix adhesion GO:0004872 receptor activity GO:0007427 epithelial cell migration, open tracheal system GO:0007411 axon guidance GO:0007608 sensory perception of smell GO:0007426 tracheal outgrowth, open tracheal system GO:0008340 determination of adult lifespan GO:0007475 apposition of dorsal and ventral imaginal disc-derived wing surfaces GO:0007155 cell adhesion GO:0008360 regulation of cell shape GO:0005488 binding GO:0007229 integrin-mediated signaling pathway GO:0031252 cell leading edge GO:0035099 hemocyte migration GO:0006930 substrate-bound cell migration, cell extension GO:0035160 maintenance of epithelial integrity, open tracheal system GO:0030718 germ-line stem cell maintenance GO:0005886 plasma membrane |
| InterPro families | IPR015812 Integrin beta subunit IPR002369 Integrin beta subunit, N-terminal IPR013111 EGF, extracellular IPR014836 Integrin beta subunit, cytoplasmic IPR002035 von Willebrand factor, type A |
| Orthology group | MCL40018 |
Nucleotide sequence:
ATGAAAACGGTTCAATTTAGACCACAGAGCATCAAAATAAAGGCTCGTCCTGGGGTACCG
GTTGATTTTATGATGTCTTACAAACCTGCAACAGATTACCCATTAGACCTTTATTACCTG
ATGGATTATTCAAAAACAATGCAAGTACATGCCACAACATTAATGGAACAGGGTTACAAG
ATTTATAAGGAGCTACGCAAACTAACTAATAACGTACGTTTGGGCATAGGAAGTTTTATC
GAGAAACCTGCTTTACCGTACGCTGATATTTCTGTGGCTGAGTCGTATTCTTTTAAAAAC
CATTTGTCGTTGACGGATAATATGACATTATTTGAAAGAGCTATAAACGAGACCCTATTC
GGTAGTAATTATGATGATCCAGAGGCAGGTTTCGATGCACTAATGCAAGCAATGGTCTGC
ATTAAGGAAATTGGTTGGAGGGAAAATTCAAGAAGAATTATTGTACTTAGCACTGATTCA
ACATATCATAGTGCAGGTGACGGAAAATTTGTGGGCGCGGTCTTGAAAAATGACATGCAG
TGTCATCTTGATGGGAATATTTATGGAGATATGTCTTTGAAGTTTGATTATCCATCTGTT
GGTCAAATAAATAATATAGCGTCAAAAAATAACTTTAAAATTATTTTTGCGGTGGAAAAG
AAAGTCATGCGCGATTATAAAGCTTTAGAGAAGAAAATTCAGGGTTCGAAGTATGTAGAA
TTGAAAACTGGTTCTAAAATTGTGGATATGATAAAAAAGGAATATTTGGAATTAGTTAGA
ACTATAACATTAGATGCTTATAATATTCCATCACTCATGGAATTAAATTATGAACCTGAC
TGTAGTAGCGGTGCCTGTAACGTAGAACACAATAAAACTTTGAATATTAAAGGCACGTTG
ACTGTCAAATCCTGTCCAGAAAACAAAGAAGTAACCCATTCTCTTATGATTGGACCTTTA
TCTTTAAACGAAAAGTTAAATATTGAGATTGAAATAGATTGTGAATGTGAATGTGAGAAA
GTGAAAAATCGTGAAGAAAATTCAAAATTATGCAGCGAAAATGGAACCTATCAATGTGGA
GTTTGTAAATGCAATGAAAATAGATCTGGCGATATTTGTCAATGTGTTGGAAATTCAGTT
GATACGGGAGATCGAAATAAATGCAAAGCAAACAATGACATTTTCCCATGTAGTATGTTT
GGTACTTGCAGATGCGGAAAGTGCGAATGTCCAAAAGGATTTTCTGGAGCTTACTGTGAA
TTTAATGATAATGCATGTCCAAGTCCTGGGGGTTTGATATGCGCAGGACACGGTAACTGC
AGTTTTGGAAGGTGCATCTGTGAACCTCATTGGACTGGTGAAGGTTGTAAATGTCCCGAA
AATAGGTGTATGGCACCGTACTCCCAGGAAATATGTTCAGGGAACGGGGATTGTGTATGT
GGTGAATGTAAATGCAAACCTATGGCTAACAATAATATATGTTCCGGCAAATTTTGTGAC
GATTGCGAGGAGCTAGCCGCAAAGAGATGCAAAGAGTTAGAGGAATATGCTTATTGTAAT
TATAATGCAAATAAAACGATTTGTGATGAGAAATTTAACCACACGGACACTGAAGTTATA
TTAGTGAACAAAACAGAAATTTACTCAGCCGATTGGTACATGGCCAAGATGTGGTGCAGA
AAATATCTTGATGATGGACGGATATTAGTTTTTAAGTATCATTATCCGAATTCAACTACT
ACGTCCTCACTTTTGCTTATCATCCAAAATGAATTGGATATGAAATCTCACGTGAATTTA
TGGATCGCCGGTGGGAGTGTTCTTGGGTCTGTCCTGTTGATTGGCTTGGGCACTGTTCTT
ATCTGGAAAGTTTTAATTGACATGTATGATAGAAGAGAATATCAGAACTTCATAAAGTCA
TCTACAGCCGCTGGTTACAATGTTGAGAATGTTGTGTACAATCCACCAATTGTTACTTAT
AGGAACCCAATGTGTGAATCCAAATAA
Protein sequence:
MKTVQFRPQSIKIKARPGVPVDFMMSYKPATDYPLDLYYLMDYSKTMQVHATTLMEQGYK
IYKELRKLTNNVRLGIGSFIEKPALPYADISVAESYSFKNHLSLTDNMTLFERAINETLF
GSNYDDPEAGFDALMQAMVCIKEIGWRENSRRIIVLSTDSTYHSAGDGKFVGAVLKNDMQ
CHLDGNIYGDMSLKFDYPSVGQINNIASKNNFKIIFAVEKKVMRDYKALEKKIQGSKYVE
LKTGSKIVDMIKKEYLELVRTITLDAYNIPSLMELNYEPDCSSGACNVEHNKTLNIKGTL
TVKSCPENKEVTHSLMIGPLSLNEKLNIEIEIDCECECEKVKNREENSKLCSENGTYQCG
VCKCNENRSGDICQCVGNSVDTGDRNKCKANNDIFPCSMFGTCRCGKCECPKGFSGAYCE
FNDNACPSPGGLICAGHGNCSFGRCICEPHWTGEGCKCPENRCMAPYSQEICSGNGDCVC
GECKCKPMANNNICSGKFCDDCEELAAKRCKELEEYAYCNYNANKTICDEKFNHTDTEVI
LVNKTEIYSADWYMAKMWCRKYLDDGRILVFKYHYPNSTTTSSLLLIIQNELDMKSHVNL
WIAGGSVLGSVLLIGLGTVLIWKVLIDMYDRREYQNFIKSSTAAGYNVENVVYNPPIVTY
RNPMCESK