| New model in OGS2.0 | DPOGS208976 |
|---|---|
| Genomic Position | scaffold1024:- 49187-53996 |
| See gene structure | |
| CDS Length | 1272 |
| Paired RNAseq reads | 85 |
| Single RNAseq reads | 202 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012539 (2e-35) |
| Best Drosophila hit | CG1750, isoform B (7e-54) |
| Best Human hit | methionyl-tRNA formyltransferase, mitochondrial precursor (6e-54) |
| Best NR hit (blastp) | PREDICTED: similar to Methionyl-tRNA formyltransferase, mitochondrial precursor (MtFMT) [Canis familiaris] (7e-61) |
| Best NR hit (blastx) | PREDICTED: similar to mitochondrial methionyl-tRNA formyltransferase [Tribolium castaneum] (1e-60) |
| GeneOntology terms | GO:0016742 hydroxymethyl-, formyl- and related transferase activity GO:0008168 methyltransferase activity GO:0016740 transferase activity GO:0006412 translation GO:0009058 biosynthetic process GO:0004479 methionyl-tRNA formyltransferase activity GO:0005739 mitochondrion GO:0003674 molecular_function GO:0008150 biological_process |
| InterPro families | IPR000276 GPCR, rhodopsin-like, 7TM IPR005794 Methionyl-tRNA formyltransferase IPR015518 Methionine tRNA Formyltransferase-like IPR017452 GPCR, rhodopsin-like superfamily IPR002376 Formyl transferase, N-terminal IPR005793 Formyl transferase, C-terminal IPR011034 Formyl transferase, C-terminal-like |
| Orthology group | MCL15459 |
Nucleotide sequence:
ATGATACTATTTTATTGCAGATGCCGAACCCTGAGGACTCCAGGGAATATATTAGTTGCT
AATCTAGCACTTAGCGACTTCTTAATGTTGGCCAAAACCCCAATATTCATATTTAACTCC
TTTCATCTCGGACCAGCTCTGGGGAAAACAGGTTGCGTGATCTACGGCTTCGCGGGTGGA
TTGAGCGGTACGACATCAATTGCCACTCTAACAGCTATCGCTTTGGACCGCTACTGGGCC
GTGGTTCATCCCCTTGAGCCGCTGCGAGCGCTAACAGCTATACGAGCCCGCTTGCTAGCT
GTCGGTGCTTGGCTGTATGCCGGGATATTTGCTACCATTCCAGCTTTAGATATCGGATAT
GACGTAATTGGCCTAAACTGTTTACAAGAAATCGATAAGATCAGGAAGAATGAAAACCTT
ATACGTCGATTGGATTTGGTCACAGCAAATAGTAGTAAAAATAAAAATGCTATTGAGAAG
TATGCCGAAACCAATAATATGCGAATCTTGCATTGGCCGAACTTGAACATCAACGAAGGT
GAATACGACATTGGTTTGATAGTGGCATTCGGTCATTTAATTAAGGCCGATGTACTCAAA
AAATTCCCTCTAGGTATGGTGAATGTTCATCCTAGTCTGTTACCCCGCTGGCGTGGTGCT
GCACCAATTATTTACACTCTAATGCATGGTGATACCGTAGGAGGTGTATCACTTATGAAA
ATTAAACCAGACATATTTGATGTTGGTGAAATAATAAGTCAACAAAGAGTTCCAGTATCT
GATACTATAAAGTTGCCAGAACTAACAAGACAATTTTCGGATATTGGTGCTAAAATGTTG
GTGAACTGCTTGAAGAACTTACCCAGAAGTCTTGAGAATGCTCAGCCTCAGAGCAATGAA
GGTGTCACCTATGCCAAGAAGATAAATAAATCGATTAGCCAAGTAAGATGGATGGAAATG
AGTGCCAAAGAGGTTTACAACTTGTACCGTGCAATATATGGATTATATCCATTAACAACA
ATGTTTAAAGATAAGCAAGTGAAGTTGTTTAATGCATTTTTAGTAAATAATGACTTGTAT
AGTGATAAACCCATCGGAACCCTTGAATATTGTGAATCAACAAAATCTATTAGGATATTG
TGTAAAGATAAGAAATTCATAAATTTCAAATCACTTAGAATAGTCGGTAGAAAAGAAATA
TCAGCTGTAGATTTTTATAATGGTTATATAAAGAATATATCTGTAGATGTAAGATTATGT
GTTGCCTGTTAG
Protein sequence:
MILFYCRCRTLRTPGNILVANLALSDFLMLAKTPIFIFNSFHLGPALGKTGCVIYGFAGG
LSGTTSIATLTAIALDRYWAVVHPLEPLRALTAIRARLLAVGAWLYAGIFATIPALDIGY
DVIGLNCLQEIDKIRKNENLIRRLDLVTANSSKNKNAIEKYAETNNMRILHWPNLNINEG
EYDIGLIVAFGHLIKADVLKKFPLGMVNVHPSLLPRWRGAAPIIYTLMHGDTVGGVSLMK
IKPDIFDVGEIISQQRVPVSDTIKLPELTRQFSDIGAKMLVNCLKNLPRSLENAQPQSNE
GVTYAKKINKSISQVRWMEMSAKEVYNLYRAIYGLYPLTTMFKDKQVKLFNAFLVNNDLY
SDKPIGTLEYCESTKSIRILCKDKKFINFKSLRIVGRKEISAVDFYNGYIKNISVDVRLC
VAC