DPGLEAN21005 in OGS1.0

New model in OGS2.0DPOGS212970 
Genomic Positionscaffold1169:- 44839-55335
See gene structure
CDS Length4638
Paired RNAseq reads  7168
Single RNAseq reads  16673
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA011615 (0.0)
Best Drosophila hit  topoisomerase 2 (0.0)
Best Human hitDNA topoisomerase 2-alpha (0.0)
Best NR hit (blastp)  DNA topoisomerase 2 [Bombyx mori] (0.0)
Best NR hit (blastx)  DNA topoisomerase 2 [Bombyx mori] (0.0)
GeneOntology terms




















  
GO:0006265 DNA topological change
GO:0005634 nucleus
GO:0003918 DNA topoisomerase (ATP-hydrolyzing) activity
GO:0000400 four-way junction DNA binding
GO:0016590 ACF complex
GO:0008623 chromatin accessibility complex
GO:0007067 mitosis
GO:0005626 insoluble fraction
GO:0007126 meiosis
GO:0005625 soluble fraction
GO:0003729 mRNA binding
GO:0003677 DNA binding
GO:0005694 chromosome
GO:0005737 cytoplasm
GO:0051310 metaphase plate congression
GO:0000819 sister chromatid segregation
GO:0005524 ATP binding
GO:0006342 chromatin silencing
GO:0000182 rDNA binding
GO:0003696 satellite DNA binding
GO:0007076 mitotic chromosome condensation
GO:0007052 mitotic spindle organization
InterPro families











  
IPR018522 DNA topoisomerase, type IIA, conserved site
IPR001241 DNA topoisomerase, type IIA, subunit B/N-terminal
IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal
IPR001154 DNA topoisomerase II, eukaryotic-type
IPR003594 ATPase-like, ATP-binding domain
IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup
IPR013759 DNA topoisomerase, type IIA, subunit B/N-terminal, alpha-beta
IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta
IPR020899 Arginine repressor, C-terminal
IPR013757 DNA topoisomerase, type IIA, subunit A, alpha-helical
IPR013760 DNA topoisomerase, type IIA, central
IPR020568 Ribosomal protein S5 domain 2-type fold
IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2
Orthology groupMCL11650

Nucleotide sequence:

ATGGCTGATATTAAGTCAATGTTCAATAGAATGAGCAATGGCACTCAGAATGGTACATCA
GAGGCTGCCAAGGGCCAGAAAGGTGCTATTGAAAAAATATATCAGAAGAAATCGCAATTG
GAACATATACTGTTACGACCCGACACTTACATAGGGTCGGTTGAACGTTCCACAGAAACA
ATGTGGGTCTATGATAAAGAGAAAGAGTGTATGGTCCAACGAGAATTGACATATGTACCA
GGTTTATATAAAATATATGACGAAATATTAGTGAACGCTGCCGATAATAAGCAAAGAGAT
CCTAAAATGGATGTCATCAAAATAGACATTAATCAAGAACAAAATACAATATCAGTATAT
AACAACGGATGCGGGATCCCTGTGGTTATGCACAAGGATGAGAAAATGTTTGTGCCCACC
ATGATCTTTGGACATTTATTGACATCTTCCAACTACAATGACGAGGAAGAGAAAGTGACG
GGAGGAAGAAATGGATACGGAGCAAAACTATGTAACATTTTCTCAACAAAGTTCACAGTG
GAGACCGCATCCAAACAATACAAGAAACATTTCAAGCAGACATGGGGTTCCAACATGACC
AAGGCCTCGGAACCCAAAGTTAAGGAGTCCGGTAAAGATGACGATTTTACAAAAGTGACT
TTTAGCCCTGATTTGGCTAAATTTAAAATGGATAAGTTAGAAGACGACATCGTAGCGTTG
ATGTCACGGAGAGCCTACGACGTGGCCGCCTCTACGACGGGGGTCAAAGTTTATCTTAAT
GGAGAAAGATTGAAAATAAATAAGTTCAAGGACTATATCGATCTATACATTAAAGGTAAA
GAGGACGAGAACGGCCAACCCCTGAAGGTTGTATACGAGAAAGTTAACGACCGGTGGGAA
GTGGCTCTGACTCTATCCGACAGGGGCTTCCAACAAGTGTCCTTCGTGAACTCCATCGCC
ACGACGAAAGGAGGCAAACACGTCGACACTGTAGCCGACAGTGTGGTCAAGAATGTATTA
GAAGTACTGAAGAAAAAAAACAAAGGCGGCGTTAACATCAAACCGTTTCAGGTTAAAACT
CACATGTGGGTATTCATAAATTGTCTGATCGTCAACCCGACCTTCGACTCACAGACCAAA
GAAAACATGACTCTGCAGGCCAAGAGTTTCGGTTCCAAATGTAATTTCTCCGAGAAGTTT
ATTAATGCGGTGACAAAATCGGGTTTAGTAGAATCTGTCCTCACGTGGGCCAAGTTCAAG
GCGCAGAATGAATTAGTTAAGGCGTCTGGAAAGAAACAGAGTAAGTTAAAGGGCATACCG
AAACTAGAAGACGCTAATGACGCGGGTACCAAGAATGCTCATCTATGCACGTTAATCCTC
ACCGAGGGAGATTCGGCCAAAACTTTAGCCGTTTCTGGACTTAGCGTAGTCGGTAGGGAT
CATTACGGCGTCTTCCCACTGAAGGGTAAACCGCTCAACGTTAGAGACGCATCACACAAG
CAGGTTCTTGAAAATGTTGAAATTAATAATTTAATAAAGATCGTAGGCTTACAGTACAAG
AAGAAATATAACAGTGTGGATGACTTGAAGTCGTTGAGGTACGGCAAGGTGATGATTATG
GCGGATCAGGATCAAGACGGGTCTCATATAAAAGGTCTCATCATTAACTTCATACACCAC
AACTGGCCGGAGTTACTCAAACTACCGTTCTTAGAGGAATTCATTACGCCCATAGTGAAA
GCTACGAAGAAAGATAAGGAATTCTCATTCTATTCCTTGCCAGAGTTCGAAGAGTGGAAG
AGGGAAACCGACAACCATCACACTTACAATATCAAATACTACAAAGGTTTGGGTACCTCC
ACATCCAAGGAGGCTAAAGAATACTTCCAGAATATGGACAGGCATAGGATCAGATTCAGA
TACAGCGGGCCCACGGACGATCATCACATCGAACTGGCCTTCTCAAAGAAAGGCGCCGAC
CAACGCAAGGAGTGGCTCACGAATCATATGGACGAAGTTAAAAGGAGGAAGGAGATCGGT
CTACCGGAAAGATATTTATATACCAAGGAGACTAAAGCCGTCACTTATTCAGATTTCGTC
AATTTAGAGCTGGTTCTCTTTTCTAACGGCGACAATGTCAGATCCATACCATCAATGATG
GATGGTCTGAAGCCTGGCCAGCGTAAGGTGATATTTACGTGCATCAAACGTAACGACAAA
CGAGAGGTCAAAGTGGCTCAGCTGGCTGGTTCCGTAGCAGAGCACTCGGCGTACCATCAC
GGTCGAAGGATGGGCCCTGAGTTTATAGCGCGACACTTTCACCATTCCCTGGCTATGACG
ATCGTTAACCTGGCCCAGAACTACGTGGGATCAAACAACATAAACCTGCTGGAACCGCGC
GGTCAGTTCGGTACGAGGCTCTGTGGCGGCAAGGACTCGGCCAGCCCGAGATACATCTTC
ACGCTCATGTCGCCACTCACGAGACTAGTCTTCCATCCTCATGACGATCCGCTGCTAGTG
CACGAATTCGAAGACAATCAGAAGATCGAACCCATACATTACGTACCCATCCTGCCCATG
GTCCTAGTGAACGGTGCTGAAGGGATCGGTACAGGGTGGTCTACTAAAATACCAAACTAC
AATCCGAGAGACATTGTAGCTAATATCCGTCGAATGCTTGATGGCGAAGATCCAGTGCCA
ATGCATCCCTGGTACAAGAACTTCCGCGGAACTATCGAGAGCTTCGGCGACAAATACGTC
ATTTCCGGCGAGGCGGCCATTTTGCCAAACGAAAAGATAGAAATCACAGAGCTTCCTGTT
GGCACTTGGACGCAGAATTATAAGGAGAACGTGCTAGAGCCTATGCTCGGTACAGACAAA
GTTAAACCTTTGATATCCGAATACAGGGAATATAACACGGACACGACTGTGAGGTTCGTA
GTGACCTTGCTGCCGGGCAAGCTGGCCGAGGTGGAGGCGGAGGGCATACACAAGGTGTTC
AAACTGCAGACTACGATATCAATGACGTGCATGAACGCGTTCGATCACAACAACTGTCTC
AAGAAGTATGATAAAGTAGAGGAAGTGCTACACGAGTTCTACGGTATACGTCTACGTTAC
TACGCTCGCCGTAAGGAATGGCTAGAGGGTCAGCTGCAGGCGGAGGCGGACAAGCTCTCC
AACCAGGCCAGGTTCATACTGGAGAAGTGCGACAAGGGACTCGTCGTGGAGAATAAGAAG
AGAAAGGTTCTGGTGGAAGAACTCATCAAGAGAGGATATGCGCCCGATCCTATCGCTGAT
TGGAAGAAACGAGCGAGTAAAATGCAGGGATTGACCGCCGTGGAAGAGGAACCGGAGTCC
GAGGAGGAGTTGGAACAAGAGGAAGTGAAGGGGAAATCAGCTGATCCTGAAAAAGTGTTC
CAGCAACTGAAGGAAGTAAAGAAATTCAATTATCTCCTGGGAATGTCCATGTGGATGTTG
ACCAAGGAGAAGAAAGACGAGCTGCTCAAACAACGAGATCAAAAACTCACGGAGCTGGAA
ACGCTGAAAGCGAAGACTCCGGCCATGCTGTGGCGAGAGGATCTGGATTCCTTCCTCATT
AAACTCGACGAGGTGGAAGAACAAGAGCGACTCGACGAGAGCAACACGAACAAGAAAACA
TCAAAGGCATTGGCCGCGAACAAAAAGAATCGCAAATCGATAATGGATATAGTGCCTTCC
GACAACGGCAGACGAGTGGAGCCGAAGATATCAGAAGATCTCATCAAGAGAATACAAGCG
GCGGAGAAGGCGAAGATAAAGAAGGAGGTCAAGAAGGAATACGACCCGGACGATCCGACC
GGCGTGAGTCCCGCCAGCGGAGAGAAGAAGCCGAAGGGACGAGTGAAGAAGGAGAAACCT
GAGAAAACAGAAAAGACAGATAAACCCGATAAAGAGGGTCTCAAACAAACCAAATTAACG
TTCAAGAAGGAGCCCAAAAAGAAGAAGGCTGCTCTTAGTAACGATAGCTCCGACGAAATG
TCCGTAACATCGGACGTGGAGATAACGTCCGCGCCCGCGCCCAGAGACAGGACGATCGTC
AGAAGAGCCGCTACTAAGGTACAAAAGTACAAGGACGGTTCGGACGAGTCGTCGGATTCA
GAGCCAGAGCTGCTAGACAACAAGATCGACTCTGATAGAGACGTTCCCGAACCGATGTCC
GATGACGATTTCACCGTCAAGAAGAATAATAAGAAACCTGCTGAAATGGACTCCGATTGT
CTATTCGATTCGTTAATCGAGGACACCAAGAAGGAGGAGTCGGCGAAAAATAATGAACCG
ATACCAACAACGGTCCTGTCGAGTGACGACGATTCAGTTCAAGAAACTGCTCCCAAGAAG
AAGCAGACCAAGAGGAAGTTGATGAACGTCGAGAAAGAGAAGCCTAAAGCGAGGAAGAGG
CCGGCCAAGGTGGTGTTCAGCCACAGCACGGACGGGGAGGACGAGGAGGCCTTCGAGACT
AAAAAGACAAAGAAGAAGGCCAATCCGAAAAAACGACAGAAGAAAGCCGACTCGGACAGC
TCTTGCGAAGAAATTACTCGCGGGAGAGATAAGGACAAGGTGTACCGCTTCAGCGACGGA
TCCGACAGCGATCTATAA

Protein sequence:

MADIKSMFNRMSNGTQNGTSEAAKGQKGAIEKIYQKKSQLEHILLRPDTYIGSVERSTET
MWVYDKEKECMVQRELTYVPGLYKIYDEILVNAADNKQRDPKMDVIKIDINQEQNTISVY
NNGCGIPVVMHKDEKMFVPTMIFGHLLTSSNYNDEEEKVTGGRNGYGAKLCNIFSTKFTV
ETASKQYKKHFKQTWGSNMTKASEPKVKESGKDDDFTKVTFSPDLAKFKMDKLEDDIVAL
MSRRAYDVAASTTGVKVYLNGERLKINKFKDYIDLYIKGKEDENGQPLKVVYEKVNDRWE
VALTLSDRGFQQVSFVNSIATTKGGKHVDTVADSVVKNVLEVLKKKNKGGVNIKPFQVKT
HMWVFINCLIVNPTFDSQTKENMTLQAKSFGSKCNFSEKFINAVTKSGLVESVLTWAKFK
AQNELVKASGKKQSKLKGIPKLEDANDAGTKNAHLCTLILTEGDSAKTLAVSGLSVVGRD
HYGVFPLKGKPLNVRDASHKQVLENVEINNLIKIVGLQYKKKYNSVDDLKSLRYGKVMIM
ADQDQDGSHIKGLIINFIHHNWPELLKLPFLEEFITPIVKATKKDKEFSFYSLPEFEEWK
RETDNHHTYNIKYYKGLGTSTSKEAKEYFQNMDRHRIRFRYSGPTDDHHIELAFSKKGAD
QRKEWLTNHMDEVKRRKEIGLPERYLYTKETKAVTYSDFVNLELVLFSNGDNVRSIPSMM
DGLKPGQRKVIFTCIKRNDKREVKVAQLAGSVAEHSAYHHGRRMGPEFIARHFHHSLAMT
IVNLAQNYVGSNNINLLEPRGQFGTRLCGGKDSASPRYIFTLMSPLTRLVFHPHDDPLLV
HEFEDNQKIEPIHYVPILPMVLVNGAEGIGTGWSTKIPNYNPRDIVANIRRMLDGEDPVP
MHPWYKNFRGTIESFGDKYVISGEAAILPNEKIEITELPVGTWTQNYKENVLEPMLGTDK
VKPLISEYREYNTDTTVRFVVTLLPGKLAEVEAEGIHKVFKLQTTISMTCMNAFDHNNCL
KKYDKVEEVLHEFYGIRLRYYARRKEWLEGQLQAEADKLSNQARFILEKCDKGLVVENKK
RKVLVEELIKRGYAPDPIADWKKRASKMQGLTAVEEEPESEEELEQEEVKGKSADPEKVF
QQLKEVKKFNYLLGMSMWMLTKEKKDELLKQRDQKLTELETLKAKTPAMLWREDLDSFLI
KLDEVEEQERLDESNTNKKTSKALAANKKNRKSIMDIVPSDNGRRVEPKISEDLIKRIQA
AEKAKIKKEVKKEYDPDDPTGVSPASGEKKPKGRVKKEKPEKTEKTDKPDKEGLKQTKLT
FKKEPKKKKAALSNDSSDEMSVTSDVEITSAPAPRDRTIVRRAATKVQKYKDGSDESSDS
EPELLDNKIDSDRDVPEPMSDDDFTVKKNNKKPAEMDSDCLFDSLIEDTKKEESAKNNEP
IPTTVLSSDDDSVQETAPKKKQTKRKLMNVEKEKPKARKRPAKVVFSHSTDGEDEEAFET
KKTKKKANPKKRQKKADSDSSCEEITRGRDKDKVYRFSDGSDSDL