New model in OGS2.0 | DPOGS212382  |
---|---|
Genomic Position | scaffold99:+ 37496-71059 |
See gene structure | |
CDS Length | 1035 |
Paired RNAseq reads   | 33 |
Single RNAseq reads   | 84 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA009688 (4e-17) |
Best Drosophila hit   | knirps-like (6e-49) |
Best Human hit | peroxisome proliferator-activated receptor delta isoform 3 (4e-17) |
Best NR hit (blastp)   | PREDICTED: similar to zinc finger transcription factor [Nasonia vitripennis] (2e-66) |
Best NR hit (blastx)   | egon protein [Clogmia albipunctata] (2e-48) |
GeneOntology terms    | GO:0004879 ligand-dependent nuclear receptor activity GO:0003700 sequence-specific DNA binding transcription factor activity GO:0005634 nucleus GO:0007427 epithelial cell migration, open tracheal system GO:0035151 regulation of tube size, open tracheal system GO:0046845 branched duct epithelial cell fate determination, open tracheal system GO:0007088 regulation of mitosis GO:0007424 open tracheal system development GO:0043565 sequence-specific DNA binding GO:0008270 zinc ion binding GO:0006355 regulation of transcription, DNA-dependent |
InterPro families    | IPR001628 Zinc finger, nuclear hormone receptor-type IPR013088 Zinc finger, NHR/GATA-type IPR008946 Nuclear hormone receptor, ligand-binding |
Orthology group | MCL19486 |
Nucleotide sequence:
ATGCAAGCGGCGTTTACTTACATCCACCCACATATGAATCAGCAGTGCAAGGTGTGCGGG
GAACCGGCGGCTGGTTTTCACTTCGGTGCTTTCACGTGTGAAGGATGTAAGTCTTTCTTC
GGGCGAACGTACAACAACCTCTCCTCGATTTCTGAATGCAAGAACAATGGTGAATGTGTC
ATCAATAAGAAAAACAGGACGGCTTGCAAGGCATGCAGGTTGCGGAAATGTTTGCTAGTC
GGCATGTCCAAATCAGGATCACGTTACGGGCGAAGATCGAACTGGTTTAAGATCCACTGC
CTTTTACAAGAGCAGCAGCAACAACACATGCAACAATTACAGACAAGTAAATCACAAACC
ACATTAAATACTTCCATCAGCCCATCTTTTTTGCCAACAAATCTTTTGCCGGCAGCCGCT
CTTGCGGAATATTATAAGAGTACAGAAAAGAATATTTTCACCGACGAAGTGACGCGACAG
AGCGTTTCGCCTTCCGATTCTGGTGCTTCTTCGGCTGACCCAGAGGATGACAATAGTTCC
AGGAGTACCAGCGGCTTGAGTATTTTCAGACCCGCCTCCTCGCCCAGCAGTGAAAAAGAC
ACTCGGATACAGGCAATCAGAAATCAAAATAAAGATGTGAGAAGAAAAAAGCCATCAACA
TTGCCACCTTCACCATTTGGTGCCATGGGAGCTGCGTCTGGTTTTTCGTTTTCACGGAGC
GCCCCCTATCTCCCAACACCAATGGCAAATATGAGATCAGTGCCATCAGGAATAGCTTGG
CAAAATCGTAGTGGCGGGGATTTGTTACTCCAATCTCCGGCGATTGCTGGCGTTGCCATC
GAACAAGACCAACCTATAGATCTGTCTATTAAATCTACAGCAGTTATATTTAGAAATTCA
AAAACCGAAGTGAGTGATTCGGAACCCGAGTTGAGTATCGATCTGAATGACGATAACGGT
AAAGACATAATGAAGAATCCCCTCGATTTGAGTCTTGTATCAAAACGAGCCGAGGAAGTT
CCGATGACTGGCTAG
Protein sequence:
MQAAFTYIHPHMNQQCKVCGEPAAGFHFGAFTCEGCKSFFGRTYNNLSSISECKNNGECV
INKKNRTACKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCLLQEQQQQHMQQLQTSKSQT
TLNTSISPSFLPTNLLPAAALAEYYKSTEKNIFTDEVTRQSVSPSDSGASSADPEDDNSS
RSTSGLSIFRPASSPSSEKDTRIQAIRNQNKDVRRKKPSTLPPSPFGAMGAASGFSFSRS
APYLPTPMANMRSVPSGIAWQNRSGGDLLLQSPAIAGVAIEQDQPIDLSIKSTAVIFRNS
KTEVSDSEPELSIDLNDDNGKDIMKNPLDLSLVSKRAEEVPMTG