| Genomic Position | scaffold8452:+ 4809-7712 |
|---|---|
| See gene structure | |
| CDS Length | 1746 |
| Paired RNAseq reads | 6 |
| Single RNAseq reads | 21 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA014395 (9e-49) |
| Best Drosophila hit | ND |
| Best Human hit | piggyBac transposable element-derived protein 3 (9e-40) |
| Best NR hit (blastp) | PREDICTED: hypothetical protein [Acyrthosiphon pisum] (1e-112) |
| Best NR hit (blastx) | PREDICTED: hypothetical protein [Acyrthosiphon pisum] (4e-102) |
| GeneOntology terms | GO:0005044 scavenger receptor activity GO:0005634 nucleus GO:0006355 regulation of transcription, DNA-dependent GO:0003700 sequence-specific DNA binding transcription factor activity GO:0016020 membrane |
| InterPro families | ND |
| Orthology group | MCL19156 |
Nucleotide sequence:
ATGCTGTTAGCCAAAGATTGCAAAAAGGTTGATTGTAACATTGCTGAAGTGATCGATGAT
TATCATGGTTTGATCAAAGTTGTTGCTGATACGCGAAATGAATTTGAAAGTTATGAAAAA
AAGGCTTTAAAAATTTCGGAAATTCAAGAATATAAAACAACGGTTTCTAGAAAAAGAAAA
AGAAAATTACATGCTGATGAATCACGGGATGGAGATGTACAACTGTCAGGACGGGACCAT
TTTAGAGTTAATACTTTTAATGTCATTCTTGACAATCTGGATTCTGAATTGCGCAAAAGA
TGTGCAGCATATGAAAAAATTAAAAAATACGCAATACATTCGAATAAACCCAGGTATAAA
CCTACTACTACACAAGAAATAGAAATTTTATTTGGGTTACATTTAGCTACTGGTATATTT
AGCTACCCTTGCTTGAAAATGTACTGGGAAACTGGAATTAGCATACCCTTGTTCTCAGAG
AATATGGCACGGGATCGCATTTTTGAATTACGTAATACTTTACACCTTGTTGATAATACA
ATAATACCAGCTGGTTGCAAAGATGCATTTTTTAAAGTTCGACCAATATTTGACGCTGTT
AGGAATCGATGTTTAGAGTTACCGCTTGAAAAAGAACTTTGTGTTGATGAGCAGATGGTT
CCTTTCACTGGGAGACATGTTGCCAAACAATACATAAAAGGTAAACCTTGTCCATGGGGA
CTGAAGATATTTTTTTTATGTGGTAAACATGGGCAAGCCTATGATTTTCTACTTTATCAA
AGCTCTAGTCCAGAACTTGATAATAATTTGACGAAAAAAATTGGATATGGTGCAGCTATT
GTCCTTCATCTCACTAAGAGAATTGGAGAAAGCAAGGGCCACGAACTGTACTTTGACAAC
TACTTCTCGTCATATCATATATTACAAATTATGAAACAAAAAGGCATTATGGCTGCATGC
ACAGCTCGTATAAATAGATTCTCCAAACCATCGCTACTAAGCGATAAAGACATGCATAAA
AAGCCTCGAGGATTTTCTCAAGAAGTAAGTAGTTTTGACGAAGATGTAACTGTGGTCAAG
TGGCTGGATAATAAGATTACCCATCTTGCTTCTAATTTTGTTGGTATTGGTGAAAAAGAC
TTAGTCAAGAGGTGGTGTAAGAAAGACAAGAAATTTATTGACGTTGAACGTCCCGAAGTG
GTCAGGAAATACAATCACGCAATGGGGGGAGTTGACCTTTTAGATCAATGCATAAGCTAC
TACAGAACCTTCATAAAATCAAAAAAATGGACTCTTCGGATGATATTTCATGCGTCTGAT
TTAGCTGTAGTGCAGGCGTACCGAGAACACCAAACTGACAATGCGTTGCTAAACATAGCA
AAGAATAAACAACTCACGTTGCTTCACTTTCGTCGTCAGGTGGCTGAAAGTCTGGTGTTG
AGGAATAAAATTATCATCGGTAAAAGAGGACGGCCCAGTGGCAGTAGCCCAATACCGCAA
ATTATTCCCAGAAGACCAGGAGAGGTTCGCCCTGTAGCGGATATAGCAAGAGACGGTGTT
GGGCATTTCCCTGCGCATGATGAGGGACTTGGGACACGGTGCAAAATGGTCGGATGCAAG
GGAAGAACCAGGATTAAATGTGAAGATGTGACTAAAACCGACTTGGAGAAAATGTTAAAT
TCGCAGCCCATTGAAGAAGAGACTTCAACAAGCACTGGGAATGTGAAATTCCTCGATAAA
TCATAG
Protein sequence:
MLLAKDCKKVDCNIAEVIDDYHGLIKVVADTRNEFESYEKKALKISEIQEYKTTVSRKRK
RKLHADESRDGDVQLSGRDHFRVNTFNVILDNLDSELRKRCAAYEKIKKYAIHSNKPRYK
PTTTQEIEILFGLHLATGIFSYPCLKMYWETGISIPLFSENMARDRIFELRNTLHLVDNT
IIPAGCKDAFFKVRPIFDAVRNRCLELPLEKELCVDEQMVPFTGRHVAKQYIKGKPCPWG
LKIFFLCGKHGQAYDFLLYQSSSPELDNNLTKKIGYGAAIVLHLTKRIGESKGHELYFDN
YFSSYHILQIMKQKGIMAACTARINRFSKPSLLSDKDMHKKPRGFSQEVSSFDEDVTVVK
WLDNKITHLASNFVGIGEKDLVKRWCKKDKKFIDVERPEVVRKYNHAMGGVDLLDQCISY
YRTFIKSKKWTLRMIFHASDLAVVQAYREHQTDNALLNIAKNKQLTLLHFRRQVAESLVL
RNKIIIGKRGRPSGSSPIPQIIPRRPGEVRPVADIARDGVGHFPAHDEGLGTRCKMVGCK
GRTRIKCEDVTKTDLEKMLNSQPIEEETSTSTGNVKFLDKS