| New model in OGS2.0 | DPOGS203263 |
|---|---|
| Genomic Position | scaffold261:- 21155-27691 |
| See gene structure | |
| CDS Length | 2397 |
| Paired RNAseq reads | 1712 |
| Single RNAseq reads | 4554 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000244 (1e-26) |
| Best Drosophila hit | scaf6, isoform A (5e-63) |
| Best Human hit | calcium homeostasis endoplasmic reticulum protein (4e-44) |
| Best NR hit (blastp) | conserved hypothetical protein [Pediculus humanus corporis] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] (2e-151) |
| GeneOntology terms | GO:0003723 RNA binding GO:0005622 intracellular GO:0005737 cytoplasm GO:0006396 RNA processing GO:0006874 cellular calcium ion homeostasis GO:0008285 negative regulation of cell proliferation |
| InterPro families | IPR000061 SWAP/Surp IPR000467 D111/G-patch IPR006569 RNA polymerase II, large subunit, CTD IPR006903 Domain of unknown function DUF618 IPR008942 ENTH/VHS |
| Orthology group | MCL12910 |
Nucleotide sequence:
ATGGAGCTTCCTCAACCACCTCAGGATCAAGATCTACGCAACATAATTGACAAACTTGCT
CAATTTGTCGCAAGAAATGGCCCAGAATTCGAAAAGATGACCAAGACAAAACAAAAAAAC
AATCCCAAATTCAGCTTTCTCTATGGTGGAGAATACTTCAACTACTATCAATATAAAGTC
ACCACCGAGCAAGCAATTCTAAAGCAATCTGCCGGTGGCCAGGCGGCCGCTCCCGCTGGG
GCTTATATGGCACAGAGCAGGCAATATGTAATGCCCCAACAGGCCAGTACACCAGCGCAG
CTCGGGCTGGCGGCGACGATAGCGGCGGCGCCGGCGCTGCAGCAGTGGCTCGCAGCCAAC
TCCGCGCCCTCGCAGCGACCCGACATCGACAGCGTGAATACTCAGATCAACATACTTAAG
GAACAAATTACTCAGTCGGAAAACAATCTCAACGCCCAACATACGGTGTTGATACAGCAA
CAGCAAGCTAAGATTAATGAGCTGGTCAACAAGGCACAGATGGAAACAATTCAGATCATG
GCAGAAGAAAACAACATCAGCTTATCGGAACTGGATAGCGTCTTGCAGCCCATCATTGAC
ACATGCACTAAAGACAGTATATCTGCAGGCAAGGGGTGGATTTTACAACATGCAACTTCA
AATGATGCCGGGAAAGTTATCTCACTCCATCTCCTGAGAAAGGTCACACAGTCTGGAGCG
CTGTTCACACAGAAGCTGCACATCATATACCTTGTCAATGATGTTTTACATCATTGTGCA
CGCAAAAACGCGGAAGATCTCAAGAAAAATTTGGAAAATGTGGTGGTTCCAATGTTTTGC
AATGCCAGTATAGCCGTCACAGAGGAACAGGAGGCTAAGTTGAATAAACTGCTGCGTCTT
TGGGAATCTAAGTCTAACTACTTCGACAGCGCTGTCATTGAAAAAATGAAGAGTCCTACG
AGTTCGTACCAGGAGTATCAGAACAACCTCATCGCCCAGCACTCTAACGCTATAGCGCAT
CTGGCGCAACAGACGAAGGCAACATTTGAGAACTACCAATCTCAACATCAAGCGTTCGTC
AGTCACACAATGCAGCAGATACAACAGATGGAGATGCAGAAACACGCCTTGGAACTACAG
AGCGGACACAACGATCACAAAGACGCTCAGCCCCAGAACAACATACCGCATCCATTCCAG
AGCAACTTCAACGATCAATACAACAACCAGCAACACAACTACGACCAGAACTTCAATTCA
TCTCATCAGTACGGCAGCGAGAGCGGCGACAACTATCCATCAAACAACAGCGTCAGCGGC
AACGAGAATAGTTACGACAGTCAGACATTCGACCAATTGACGAATAAGCCGGATATAGAA
GAGCCGGATTTATCAAATCTGCCGAAAATCAATTTCTCTCAACCCCCGCCTGGATTCAAG
CCTCAAGAGAACAGTACAATAATACCGTTTCAGAACGGTCTGCCAGATCTAAGCAAACCC
CCGCCCGGCTTCCCGCCGTTCCCAGAAATTAACAACGAAGACCTGATGCCCTCCGTACCT
TACTTTGAGTTACCAGCGGGGCTGATGGTACCACTCATTATGTTAGAAGACGACAGATAC
CGCCCCCTGGACCCGGCCGCCATCCGTCTACCGCCGCCCGCGCCGCCCAACGAGCGACTG
CTGGCCGCCGTAGACGCTTTCTACGCTTCACCAAACCACGAACGACCTAGAGATAATGAA
GGCTGGGAGAAATTAGGTTTATATGAATACTACAAAGCCAAAAACTCAAGTAGAAAGAAA
AAAGAAGATGAAATCGCTCAAGGTTTACGGGAAAAGTCAAAATCACCAAGTCCCATACCT
AAAGACCTACAGAAGCAGCCCACGCCGCCCGGGAGGAGATATAGGTCATTAAGTAGAACA
CCAGAAAAAACCCAGTCACCGCAGAGAAAGTCACGATCAAGGACGCCCTCGCCCAGAAGA
AAGTCGTCATGGAGGCGGGAACGGGAACGGGAAAGTCGACGCCGTTCCCGGTCCCGGTCT
CGTTCCCGGTCCCGAAGTCGATCACGAGAACGTGAAAGACATCGCGAGTCACCTCGCAAT
AGACGAGTAGAACGATCTAGATCACCCACACCGCCTAGCTTCCTTTCATCGAGCGGTTTG
GACCCCAGCAACAAAGGTCACCAGCTGCTACAGAAGATGGGCTGGAGTGCGGGCGGGCTG
GGAGCTGCTGGGCAGGGCATCGCTGAACCCATCAGTGGAGGAACAGTACGAGACAAACAG
GATCAGTATAAGGGCGTAGGAGTAAATCTGAATGACCCATATGAAAACTTCAGAAAGAAC
AAGGGAGCAGCTTTTATAACGCGAATGAAAGAAAGAGCTTTGGAGCGATCGTCGTGA
Protein sequence:
MELPQPPQDQDLRNIIDKLAQFVARNGPEFEKMTKTKQKNNPKFSFLYGGEYFNYYQYKV
TTEQAILKQSAGGQAAAPAGAYMAQSRQYVMPQQASTPAQLGLAATIAAAPALQQWLAAN
SAPSQRPDIDSVNTQINILKEQITQSENNLNAQHTVLIQQQQAKINELVNKAQMETIQIM
AEENNISLSELDSVLQPIIDTCTKDSISAGKGWILQHATSNDAGKVISLHLLRKVTQSGA
LFTQKLHIIYLVNDVLHHCARKNAEDLKKNLENVVVPMFCNASIAVTEEQEAKLNKLLRL
WESKSNYFDSAVIEKMKSPTSSYQEYQNNLIAQHSNAIAHLAQQTKATFENYQSQHQAFV
SHTMQQIQQMEMQKHALELQSGHNDHKDAQPQNNIPHPFQSNFNDQYNNQQHNYDQNFNS
SHQYGSESGDNYPSNNSVSGNENSYDSQTFDQLTNKPDIEEPDLSNLPKINFSQPPPGFK
PQENSTIIPFQNGLPDLSKPPPGFPPFPEINNEDLMPSVPYFELPAGLMVPLIMLEDDRY
RPLDPAAIRLPPPAPPNERLLAAVDAFYASPNHERPRDNEGWEKLGLYEYYKAKNSSRKK
KEDEIAQGLREKSKSPSPIPKDLQKQPTPPGRRYRSLSRTPEKTQSPQRKSRSRTPSPRR
KSSWRRERERESRRRSRSRSRSRSRSRSRERERHRESPRNRRVERSRSPTPPSFLSSSGL
DPSNKGHQLLQKMGWSAGGLGAAGQGIAEPISGGTVRDKQDQYKGVGVNLNDPYENFRKN
KGAAFITRMKERALERSS