| New model in OGS2.0 | DPOGS209710 |
|---|---|
| Genomic Position | scaffold744:- 30373-31290 |
| See gene structure | |
| CDS Length | 669 |
| Paired RNAseq reads | 5806 |
| Single RNAseq reads | 18537 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008921 (1e-86) |
| Best Drosophila hit | elongation factor 1 beta (3e-63) |
| Best Human hit | elongation factor 1-beta (6e-57) |
| Best NR hit (blastp) | elongation factor 1 beta' [Plutella xylostella] (7e-104) |
| Best NR hit (blastx) | elongation factor 1-beta' [Bombyx mori] (2e-88) |
| GeneOntology terms | GO:0005829 cytosol GO:0003747 translation release factor activity GO:0003746 translation elongation factor activity GO:0005853 eukaryotic translation elongation factor 1 complex GO:0006414 translational elongation GO:0005085 guanyl-nucleotide exchange factor activity GO:0005811 lipid particle |
| InterPro families | IPR001326 Translation elongation factor EF1B, beta/delta chains, conserved site IPR014038 Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange IPR018940 Elongation factor 1 beta central acidic region, eukaryote IPR014717 Translation elongation factor EF1B/ribosomal protein S6 |
| Orthology group | MCL12593 |
Nucleotide sequence:
ATGGCAATCGGAGACGTTAAATCTGCACAAGGTCTAAGTGAATTGAACCAATATTTGGCA
GAAAAGAGCTACATATCTGGATATGTGCCCTCTCAAGCCGATGTTCAAGTTTTCGAGGAA
GTAGGCAAAGCGCCGGCCGCTAGCCTGCCACACGCTCTCCGTTGGTACAACCACATCGCC
TCATATTCTTCCGCAGAGCGTAAGGCATGGGCTGATGGAGTGAGCCCACTCAGCGCCGGC
GCTAAACCAACAGCACCTGCAGCCGCCAAGAAAGATGATGATGACGATGACATCGATCTT
TTCGGCTCCGGTGATGAAGAAGAGGATGCAGAGGCAGCAAGAGTTCGTGAGGAACGTCTG
AAGGCGTATGCTGACAAAAAATCTAAGAAACCCACCCTTATTGCTAAGTCATCTATAATC
CTTGATGTGAAACCATGGGATGATGAAACTGACATGGCTGAAATGGAAAAGCAAGTGAGA
ACCATTGAAATGGACGGTCTCTTATGGGGTGCCTCCAAACTGGTACCGGTTGGCTATGGT
ATCAATAAATTGCAAATCATGTGTGTCATTGAAGATGACAAGGTTTCTGTTGATCTTCTA
ACAGAGAAGATCCAAGAATTTGAAGATTTCGTCCAGTCTGTAGACATTGCTGCCTTCAAT
AAAATCTAA
Protein sequence:
MAIGDVKSAQGLSELNQYLAEKSYISGYVPSQADVQVFEEVGKAPAASLPHALRWYNHIA
SYSSAERKAWADGVSPLSAGAKPTAPAAAKKDDDDDDIDLFGSGDEEEDAEAARVREERL
KAYADKKSKKPTLIAKSSIILDVKPWDDETDMAEMEKQVRTIEMDGLLWGASKLVPVGYG
INKLQIMCVIEDDKVSVDLLTEKIQEFEDFVQSVDIAAFNKI