| New model in OGS2.0 | DPOGS215464 |
|---|---|
| Genomic Position | scaffold2697:- 9986-14196 |
| See gene structure | |
| CDS Length | 1296 |
| Paired RNAseq reads | 1695 |
| Single RNAseq reads | 4895 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012127 (9e-08) |
| Best Drosophila hit | chromatin assembly factor 1 subunit, isoform A (0.0) |
| Best Human hit | histone-binding protein RBBP4 isoform b (0.0) |
| Best NR hit (blastp) | PREDICTED: similar to Chromatin assembly factor 1 subunit CG4236-PA [Apis mellifera] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to Chromatin assembly factor 1 subunit CG4236-PA [Apis mellifera] (0.0) |
| GeneOntology terms | GO:0016584 nucleosome positioning GO:0042826 histone deacetylase binding GO:0005634 nucleus GO:0006281 DNA repair GO:0042393 histone binding GO:0006334 nucleosome assembly GO:0016590 ACF complex GO:0035035 histone acetyltransferase binding GO:0016573 histone acetylation GO:0016589 NURF complex GO:0005700 polytene chromosome GO:0005678 chromatin assembly complex GO:0042766 nucleosome mobilization GO:0016585 chromatin remodeling complex GO:0006335 DNA replication-dependent nucleosome assembly GO:0003682 chromatin binding GO:0006342 chromatin silencing GO:0006350 transcription GO:0007346 regulation of mitotic cell cycle GO:0046974 histone methyltransferase activity (H3-K9 specific) GO:0016571 histone methylation GO:0035098 ESC/E(Z) complex GO:0046976 histone methyltransferase activity (H3-K27 specific) GO:0007307 eggshell chorion gene amplification GO:0031523 Myb complex GO:0005667 transcription factor complex GO:0000910 cytokinesis GO:0000122 negative regulation of transcription from RNA polymerase II promoter GO:0048666 neuron development GO:0048813 dendrite morphogenesis GO:0007517 muscle organ development GO:0042054 histone methyltransferase activity |
| InterPro families | IPR001680 WD40 repeat IPR011046 WD40 repeat-like-containing domain IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR015943 WD40/YVTN repeat-like-containing domain IPR019781 WD40 repeat, subgroup IPR022052 Histone-binding protein RBBP4 IPR019775 WD40 repeat, conserved site IPR020472 G-protein beta WD-40 repeat |
| Orthology group | MCL11694 |
Nucleotide sequence:
ATGGGTGATAAAGATGGAGAAACCTTTGATGATGCTGTGGAAGAGAGGGTTATCAACGAG
GAGTACAAAATATGGAAGAAGAATACACCTTTCTTATATGACCTGGTCATGACACACGCT
TTAGAGTGGCCCTCGCTGACCGCTCAGTGGCTTCCAGATGTCACAAGACCTGAAGGCAAG
GATTACTCCGTACACAGATTGATTCTGGGCACTCACACATCAGATGAACAAAACCACCTC
CTCATTGCAAGTGTACAACTTCCTAATGAGGATGCACAGTTTGATGCAAGCCACTATGAT
AATGATAAGGGTGAATTTGGTGGTTTTGGATCAGTTTCTGGTAAGATAGATATAGAAATT
AAAATTAATCATGAGGGTGAAGTCAATAGGGCTCGCTACATGCCCCAAAATCCTTGCGTC
ATTGCCACAAAGACACCATCTTCTGATGTCCTCGTATTTGACTACACCAAACATCCATCA
AAACCTGAACCTTCCGGAGAATGTCATCCCGACCTTAGATTGCGAGGACACCAAAAGGAA
GGTTACGGTTTGTCATGGAACCCTAATCTTAATGGATACCTTTTATCAGCCAGTGACGAT
CATACAATCTGCTTATGGGATATAAACGCCACTCCTAAGGAAGGGCGTGTGATTGAAGCC
AAGTCTGTCTTCACGGGACACACAGCGGTGGTTGAGGATGTGGCGTGGCATCTGCTTCAT
GAATCCTTGTTTGGATCTGTGGCCGACGATCAGAAGCTCATGATATGGGATACGAGATGT
AACAACACGTCCAAGCCATCCCACACCGTGGATGCTCACACCGCTGAAGTGAACTGCCTT
AGCTTCAACCCATACTCGGAATTTATTCTCGCCACTGGCAGTGCTGACAAAACTGTGGCG
TTGTGGGACTTGCGTAACCTTAAACTGAAGTTGCACTCGTTTGAGTCGCACAAGGACGAG
ATCTTCCAAGTACAGTGGTCGCCACACAACGAGACCATTCTGGCTAGCAGTGGCACAGAC
AGGAGGCTGCATGTTTGGGATCTATCGAAGATTGGTGAGGAACAGACGGCTGAGGACGCG
GAGGACGGGCCCCCGGAACTGTTGTTCATCCACGGAGGTCACACCGCCAAGATATCCGAC
TTCTCATGGAACCCCAACGAGCCGTGGGTCATCTGCTCCGTCTCCGAGGACAACATCATG
CAGGTGTGGCAAATGGCTGAGAACATCTACAACGATGAGGAACCGGAAACGCCGGCTTCG
GAGCTGGAATCGGGAGTCAACGTGAACCACGGTTAG
Protein sequence:
MGDKDGETFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGK
DYSVHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASHYDNDKGEFGGFGSVSGKIDIEI
KINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPEPSGECHPDLRLRGHQKE
GYGLSWNPNLNGYLLSASDDHTICLWDINATPKEGRVIEAKSVFTGHTAVVEDVAWHLLH
ESLFGSVADDQKLMIWDTRCNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVA
LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQTAEDA
EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPETPAS
ELESGVNVNHG