| New model in OGS2.0 | DPOGS201071 |
|---|---|
| Genomic Position | scaffold1249:+ 11770-32470 |
| See gene structure | |
| CDS Length | 4335 |
| Paired RNAseq reads | 122 |
| Single RNAseq reads | 290 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007203 (3e-09) |
| Best Drosophila hit | Son of sevenless (2e-31) |
| Best Human hit | ras-specific guanine nucleotide-releasing factor 1 isoform 3 (0.0) |
| Best NR hit (blastp) | PREDICTED: similar to AGAP001238-PA [Acyrthosiphon pisum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to AGAP001238-PA [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0005886 plasma membrane GO:0035254 glutamate receptor binding GO:0048168 regulation of neuronal synaptic plasticity GO:0005088 Ras guanyl-nucleotide exchange factor activity GO:0007165 signal transduction GO:0008624 induction of apoptosis by extracellular signals GO:0005515 protein binding GO:0032320 positive regulation of Ras GTPase activity GO:0005085 guanyl-nucleotide exchange factor activity GO:0019717 synaptosome GO:0005089 Rho guanyl-nucleotide exchange factor activity GO:0031175 neuron projection development GO:0046578 regulation of Ras protein signal transduction GO:0035023 regulation of Rho protein signal transduction GO:0005829 cytosol GO:0035020 regulation of Rac protein signal transduction GO:0006915 apoptosis GO:0008283 cell proliferation GO:0007616 long-term memory GO:0032863 activation of Rac GTPase activity GO:0005622 intracellular GO:0030426 growth cone |
| InterPro families | IPR001849 Pleckstrin homology domain IPR001895 Guanine-nucleotide dissociation stimulator CDC25 IPR000219 Dbl homology (DH) domain IPR000048 IQ motif, EF-hand binding site IPR000651 Ras-like guanine nucleotide exchange factor, N-terminal IPR023578 Ras guanine nucleotide exchange factor, domain IPR019804 Ras guanine-nucleotide exchange factor, conserved site IPR011993 Pleckstrin homology-type IPR008937 Ras guanine nucleotide exchange factor |
| Orthology group | MCL11675 |
Nucleotide sequence:
ATGTTGAGTCCGAAGATCCAACGCTCAATCCGCGTCAACGACGGCCAGCTGATAGCGTTG
TCAGAGAGAGCCCAGTACGACCACTCACAGGCCGGGTACCTTCACAAACGAAGCTCCGAC
AATACAAAATGGCAGCTACGGTGGTTCATACTGTATCAGAACCTGTTGTTTTATTACGAA
TCGGAGAACAACACTCGTCCCACTGGTATTCTGTTGCTAGAGGGCTCCTACTGCGAGAGA
CTTAGCAAAGCGCCGCTTGAGAGGAACGCTTCGTTCTGCTTTACAATATCGTATCGTCGT
GAGAGCCAGCGTCAGTACGAGCTGAGAGCCGCGTCTGAGGTAGACTGCTCACACTGGGTC
GACGCTATCCGGGAGGCGAGCTTCAACAAGCTGTTGCAGCAGAAAGAGGAGCTGGAACAG
AAGCAGCTGCATCTTCTGCAGGTGGTGGAGAGCGAGCGAACCTCTCGCTGGCAGTACGCC
CAACAGTGTGACGAACTATCCAACGAGGTCAAGAAACTGAGGACAGAGGTAGGAGTTATT
AGCAGCAGGGCGAAGCTGTCTAGCAAGCACAGCTTCAACAAGCTGTTGCAGCAGAAAGAG
GAGCTGGAACAGAAGCAGCTGCATCTTCTGCAGGTGGTGGAGAGCGAGCGAACCTCTCGC
TGGCAGTACGCCCAACAGTGTGACGAACTATCCAACGAGGTCAAGAAACTGAGGACAGAG
TTATGCGCTTACAAGAAGGAACACGAGCCAGCAACGCGAGCGGAATCAACTACTAGCCTT
TCACCCACTGACTCCGAGGAGATCGATCCCAACGAGTTGAGGAAGATTAAAAAAGTTCAG
AGCTTCTTCCGCGGTTGGCTATGCAGGCGGCGTTGGAAGCAGATTGTCGAACAGTATATC
AAAAGTCCTCACGCTGAGAGTATGAGGAAAAGAAATAGTCTGGTCTTCAAGATGGTCGAA
GCTGAAGAGGAATATTTGGAACAGATGGAGTGCTTGGTCACCTGCTTTTTAAGGCCTTTC
AAAATGGCAGCAAGCTCGAAAAAACCGCCCTGCACTCACGAGGATGTCAACTCTATCTTC
CTCAACAGCGAAACTGTGTTGTTTTTACATCAAATATTTTTCAAGGGATTGACTTCCAGG
ATGGAGTCATGGCCGACGCTCGTTTTAGGAGACCTTTTCGACATGCTGTTGCCGATGTTG
ACGATCTACCAAGAATACGTGCGGAACCACCACTACTCGCTGCAGGTGCTCACGGAATGC
AAACAGAACCAGCCCTTCACGCAGCTTCTAGCACGTCTCGAGAGCAAACCGGCCTGCCAG
TCGAGACTGCTGGAGACATTCTTGACGTATCCTATGCATCAGATTCCTAGATACATCATC
ACTCTGCACGAGTTATTGGCACACACGCCACACGACCACGTGGAGCGGCGCAGCCTACAG
CACGCCCGCGCTCAGCTCGAGGAACTGTCCAGACAAATGCATGATGAGGTCAGCGAAACT
GAAAATTTGAGGAAGAATCTAGCGGTGGAACGAATGATAATTGAAGGATGTGACATACTG
CTGGATGTTAACCAAGTTTTCATTCGACAAGGAACTCTCTCCCAAGTGGTAGGTAAAGGA
CGGCGAGCAAATTTACAGGCTCGTCAGGCATTTCTGTTCAGTAACCACTTGCTGTTGACG
ACACGAGCTGCTGGAGGACGTCTTCACCTGCCGCCATCAGGACGTCTCCCGCTACATGAC
GCACTGCTTATTGAGGACCCCTCAAACCACGAAGATGATGATTCCACATCAGTTTGCTCA
TCGCCTGGAGGAGATCTCTATCACGGCAAGGACTTTAAAATACTCGTTGAAGTCAAGGGT
GAACAAATTTGTGCACATTTAGTTGCAGCGACTTTGGAAGATAAAGCGGCGTGGACAAGC
GAGTTGGCCCAGTGTATGGAGAGTGCTGCATTAACTGAACTGTTACGAGCTTGCGGCTCA
TGCGGTGCAGCATCGGCAAGTCTCCCCGCTTGCAGGTCTGACAGAGCCCTGTTCACTGAC
GATGTGGATATCAGGTTCAGCAGGACACTGAACTCCTGCAAGGTGCCGCAAATCAGATCG
GCAACTCCGGAACGATTGCTGCAAAGATTGACGGATCTGCGTTTCTTATCTGTGGACTTC
CTGAACACCTTCTTGTTGACGTACCGCGTCTTCACGGATGGAGTCAAAGTACTAGAGGCT
CTGAAGGCGGTGTTTTACGAGCAGTCACAGCAGGAGCTGGAGTTGGCGCCTCCTGATACC
ACCAGGAAGGCTAGCGGGGCCAGCTCCGTTTCTGGTTATGGATCTGAATATAGCGACCGT
GATTGGCAGTCAAGATTTTGGAGAACGTCTAGAAAAAGTGAAGAAGATGATAAATTATCA
CCGTATCTAATGGCGCCATCGCGACGCACTTCCGCTGTTAAGGCTGAAGAAGATAACAGC
CATCTTCAAATACCAAAAATAATGGCCACCTCGTCCAGTAACGAAACACTGAAAGGCACG
TCACCATCTTCGCCTGGCGCTTTGAGTTCAGTGACTCTTGTGGGTAGTCCTAACAAAACC
AGTCCAGTGGAACCAGCTAAAACTGAGAAAAAGTCACCGACTAAAGACAATGATACAGCA
GCTGCTATCATGAAAGTAGAGAGCATTGAGCTCGTCGATCAAAGCGACGAAGACATCAAG
TATAAAGAAGAAGAACCTGAGAAGAACAAGCATAAGATTGACGATAAATTTAAAATATCC
CAAAGATTTTCAGAAGTTTGCAATCAGCGAGTACGTACCATGTCTGAGAGCCCGCGGCGC
CTGCAGCCGGTGGCGGGCGGGGCTGCGTTGGCGGACGCGCGGCGCCGCTCCGAGGGGGCG
CGGGAGGTTACTGAGACCGAGCCGAGGAGAGCCTCGGATATCGCCGCTCGAGCACTACCC
AGACGGTCTGTCAGTGAGAGACGCTGTACAAACTCATCCATGAACAGCGAGCGTCGTCGG
TACTGGGGCGGCTCAGAGCCGAGGACATCTGTCACATCTCAAGTGTCACAGATGCAGAAC
TACCGCCGTGAAACCAGTCAACCGAAAGCCGGCGTCGTCATCACTTCGTTCAGACAGTCG
CACAGAAGGAGCAGCACATCAACTGCGGCAGCAGCATTTGCTGTGGCTACGTCAGCCTCT
TCTAACCCGAGATCACCACCGCCTACATCACCGCCACAAAACAGACGCGATTCTGTCATC
TCAACTGCGGCTACCATGAGAGTGCTTAATGTATTAAGGCACTGGGTTTCAAAGCATTCT
TCGGACTTCTGGTCGGATGAACGTCTCCGAGGTATGACGATGGATTTCCTTAAAGAGATC
GAAGGCAGCCCTGGGCTACTGCCGGCTGAGCACAAAGCTGCTGCTCAATTGCTTCGTCTT
TTAGAACGCGCCCCGGACAGGGCAGTCGACTTGAAAGCTCTGTTCACCCCATCAAAGATA
CCGACCAAAGAGAGCATAGAAACATTATCTGCTCTCGAGATCGCCGAGCAGATGACGTAC
TTGGATTATCAAATATTCAGCGCCATCCACAGCGAGGAGTTCCTGAGCCAAGCCTGGACA
AAAGCAGATAAAGCTGAACGAGCTCCCCATATTGTAATGATGACTGGTCATTTCAACCAT
ATCTCTAACCTGGTGATCTCCGAAATCCTGAAGAAATACACTCTTACAGGTCGTGTATCG
GCTATCGAAAAATGGGCAGCGGTTGCTGACATTATGCGATGTTTGCACAACTTTAACGGA
GTACTCCAAGTGTGTGCGGCTCTCTCTAACACGGCGGTGTACCGTCTCAAGAAGACTTGG
GACAAAGTCTCTAAAACTACGAAACAGACTATCGAGAAAATGCAGAATATAATATCATCG
GAATGCAGATTTAGAATTCTAAGAGAATCTCTGCACAGATGCGACCCGCCCTGCATTCCG
TACTTGGGTATGTATTTATCGGATTTGTCATTCATCGAAGAGGGCACGTCCAATTACACT
CCCGATGGACTTCTGAACTTTTCAAAGATGAGAATGATAGCACACGTGATCCGAGAGATC
AGAAACTTTCAACAAACGCCGTACAAGATCGACCACATTCCCAAGGTATGCGACTACCTC
CTCGAGGAATCCTTCATTATTCCCGAGGAGCGTCAGTTCACCCTCTCCTTGGAGCTGGAG
CCGCGAGCCCCCCGTGGGTCCGCCGGTGGGCTGGTGGTGACCCCCACCACGCCCGCCTCT
CCCGCCGCTCAACGCCGCCGGCGAGCATCTTTGGCAGCGCTAGCACCTCTTGCGCAACTC
CGCAACGATCGCTAG
Protein sequence:
MLSPKIQRSIRVNDGQLIALSERAQYDHSQAGYLHKRSSDNTKWQLRWFILYQNLLFYYE
SENNTRPTGILLLEGSYCERLSKAPLERNASFCFTISYRRESQRQYELRAASEVDCSHWV
DAIREASFNKLLQQKEELEQKQLHLLQVVESERTSRWQYAQQCDELSNEVKKLRTEVGVI
SSRAKLSSKHSFNKLLQQKEELEQKQLHLLQVVESERTSRWQYAQQCDELSNEVKKLRTE
LCAYKKEHEPATRAESTTSLSPTDSEEIDPNELRKIKKVQSFFRGWLCRRRWKQIVEQYI
KSPHAESMRKRNSLVFKMVEAEEEYLEQMECLVTCFLRPFKMAASSKKPPCTHEDVNSIF
LNSETVLFLHQIFFKGLTSRMESWPTLVLGDLFDMLLPMLTIYQEYVRNHHYSLQVLTEC
KQNQPFTQLLARLESKPACQSRLLETFLTYPMHQIPRYIITLHELLAHTPHDHVERRSLQ
HARAQLEELSRQMHDEVSETENLRKNLAVERMIIEGCDILLDVNQVFIRQGTLSQVVGKG
RRANLQARQAFLFSNHLLLTTRAAGGRLHLPPSGRLPLHDALLIEDPSNHEDDDSTSVCS
SPGGDLYHGKDFKILVEVKGEQICAHLVAATLEDKAAWTSELAQCMESAALTELLRACGS
CGAASASLPACRSDRALFTDDVDIRFSRTLNSCKVPQIRSATPERLLQRLTDLRFLSVDF
LNTFLLTYRVFTDGVKVLEALKAVFYEQSQQELELAPPDTTRKASGASSVSGYGSEYSDR
DWQSRFWRTSRKSEEDDKLSPYLMAPSRRTSAVKAEEDNSHLQIPKIMATSSSNETLKGT
SPSSPGALSSVTLVGSPNKTSPVEPAKTEKKSPTKDNDTAAAIMKVESIELVDQSDEDIK
YKEEEPEKNKHKIDDKFKISQRFSEVCNQRVRTMSESPRRLQPVAGGAALADARRRSEGA
REVTETEPRRASDIAARALPRRSVSERRCTNSSMNSERRRYWGGSEPRTSVTSQVSQMQN
YRRETSQPKAGVVITSFRQSHRRSSTSTAAAAFAVATSASSNPRSPPPTSPPQNRRDSVI
STAATMRVLNVLRHWVSKHSSDFWSDERLRGMTMDFLKEIEGSPGLLPAEHKAAAQLLRL
LERAPDRAVDLKALFTPSKIPTKESIETLSALEIAEQMTYLDYQIFSAIHSEEFLSQAWT
KADKAERAPHIVMMTGHFNHISNLVISEILKKYTLTGRVSAIEKWAAVADIMRCLHNFNG
VLQVCAALSNTAVYRLKKTWDKVSKTTKQTIEKMQNIISSECRFRILRESLHRCDPPCIP
YLGMYLSDLSFIEEGTSNYTPDGLLNFSKMRMIAHVIREIRNFQQTPYKIDHIPKVCDYL
LEESFIIPEERQFTLSLELEPRAPRGSAGGLVVTPTTPASPAAQRRRRASLAALAPLAQL
RNDR