| New model in OGS2.0 | DPOGS205530 |
|---|---|
| Genomic Position | scaffold699:- 21774-27737 |
| See gene structure | |
| CDS Length | 1077 |
| Paired RNAseq reads | 761 |
| Single RNAseq reads | 3184 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000082 (2e-69) |
| Best Drosophila hit | Actin-related protein 14D, isoform A (7e-81) |
| Best Human hit | actin-related protein 2 isoform b (2e-71) |
| Best NR hit (blastp) | actin [Aedes aegypti] (2e-84) |
| Best NR hit (blastx) | GJ19344 [Drosophila virilis] (2e-81) |
| GeneOntology terms | GO:0005884 actin filament GO:0003779 actin binding GO:0007010 cytoskeleton organization GO:0005885 Arp2/3 protein complex GO:0008064 regulation of actin polymerization or depolymerization GO:0015629 actin cytoskeleton GO:0005200 structural constituent of cytoskeleton |
| InterPro families | IPR020902 Actin/actin-like conserved site IPR004000 Actin-like |
| Orthology group | ND |
Nucleotide sequence:
ATGGATGATCAGGGAAGAAAAGTTATCGTTTGTGACAATGGCACAGGTTTCGTAAAATGC
GGATACGCCGGCAGTAACTTCCCTGCGTTCATTTTTCCGTCAATGGTCGGCCGGCCGATT
ATTAGAGCGGAAAATAAAATCGGAGACATTGATGTTAAGGATTTGATGGTCGGAGATGAA
GCGTCTCAACTCCGTTCCATGCTCGAAGTCAGTTATCCCATGGAAAATGGCGTGGTTAGA
AACTGGGAGGATATGTGTCACGTCTGGGATTACACATTTGGTCCCAGCAAGATGAATATT
GACCCCAAGGACACCAAAATACTGCTCACCGAGCCACCGATGAACCCCACTAAAAATAGA
GAGAAAATGATTGAGGTTATGTTTGAGAAGTACGGTTTCGACAGCGCCTACATAGCCATA
CAAGCGGTGCTCACGCTGTACGCCCAGGGACTGATATCGGGAGTGGTGGTGGACTCAGAC
GGGAGGGTCATCAAAGTGGGGGGAGAACGGTTTGAAGCACCCGAGGCCCTGTTCCAGCCG
CACCTCATCAATGTCGAGGGTCAAGGGATCGCTGAACTTGTCTTCAACACTATACAGGCG
GCGGACATAGACATGAGGAACGAGTTGTACAAACACATCGTGCTGTCCGGGGGCTCCACC
ATGTACCCGGGGCTGCCCTCGCGGCTCGAGAGGGAGATCAAGCAACTGTACCTGGAGCGA
GTGCTGAGGAACGACTCGGAGAAGCTGGCGAAATTCAAGATCCGTATTGAGGATCCGCCG
CGCCGTAAGGACATGGTGTTCATCGGCGGCGCCGTGCTGGCCGAGGTGTGCAAGAACAGG
GACAACTTCTGGCTCACCAGGAGCGACTACATGGAACAGGTGGGTCAGCCAGCGGCCGCT
GGGTTATATGTAGCAGGCACTAGTGAATTCAACGACACTGGTCGTGCAAACTACACGTTA
CTTTGTTTCCCTCCCTTTCTTACTATCTCTCTCTCTCTCTCTCTCTCTCTATCTATCTAT
CTATCTATCTATCTATCTATCAGAATATACATACATACATTTATATTTTCTGAATAA
Protein sequence:
MDDQGRKVIVCDNGTGFVKCGYAGSNFPAFIFPSMVGRPIIRAENKIGDIDVKDLMVGDE
ASQLRSMLEVSYPMENGVVRNWEDMCHVWDYTFGPSKMNIDPKDTKILLTEPPMNPTKNR
EKMIEVMFEKYGFDSAYIAIQAVLTLYAQGLISGVVVDSDGRVIKVGGERFEAPEALFQP
HLINVEGQGIAELVFNTIQAADIDMRNELYKHIVLSGGSTMYPGLPSRLEREIKQLYLER
VLRNDSEKLAKFKIRIEDPPRRKDMVFIGGAVLAEVCKNRDNFWLTRSDYMEQVGQPAAA
GLYVAGTSEFNDTGRANYTLLCFPPFLTISLSLSLSLSIYLSIYLSIRIYIHTFIFSE