| New model in OGS2.0 | DPOGS200816 |
|---|---|
| Genomic Position | scaffold1309:+ 9169-13148 |
| See gene structure | |
| CDS Length | 546 |
| Paired RNAseq reads | 95 |
| Single RNAseq reads | 358 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009871 (2e-10) |
| Best Drosophila hit | calmodulin, isoform B (2e-55) |
| Best Human hit | calmodulin (4e-54) |
| Best NR hit (blastp) | calmodulin-A, putative [Pediculus humanus corporis] (2e-81) |
| Best NR hit (blastx) | calmodulin-A, putative [Pediculus humanus corporis] (4e-80) |
| GeneOntology terms | GO:0016028 rhabdomere GO:0005737 cytoplasm GO:0016056 rhodopsin mediated signaling pathway GO:0006468 protein amino acid phosphorylation GO:0016061 regulation of light-activated channel activity GO:0016060 metarhodopsin inactivation GO:0005513 detection of calcium ion GO:0016059 deactivation of rhodopsin mediated signaling GO:0016062 adaptation of rhodopsin mediated signaling GO:0005509 calcium ion binding GO:0032036 myosin heavy chain binding GO:0031476 myosin VI complex GO:0070855 myosin VI head/neck binding GO:0007052 mitotic spindle organization GO:0000922 spindle pole GO:0051533 positive regulation of NFAT protein import into nucleus GO:0051383 kinetochore organization GO:0005875 microtubule associated complex GO:0007099 centriole replication GO:0005516 calmodulin binding |
| InterPro families | IPR018249 EF-HAND 2 IPR018247 EF-Hand 1, calcium-binding site IPR011992 EF-hand-like domain IPR002048 Calcium-binding EF-hand IPR018248 EF-hand |
| Orthology group | MCL17972 |
Nucleotide sequence:
ATGGCGCAGGCCGACAGAACTGATGACATCTACAATAAAGAATACAGAAGAATACGAAGG
ATTACCAAAGATTTGGCGACGAGACAAATTTCTTCTGAATATGGTCTTACGGAAGAACAA
GTAGCAGAATTCAAGGAGGCTTTCATGCTGTTCGACAAAGACGAAGACGGCACAATAACG
ATGGCGGAGCTTGGTGTCGTGATGAGATCTCTCGGACAGAGACCTTCCGAGACTGAGTTG
CGAGATATGGTGAAGGAAGTCGATCAAGACGGTAATGGTACCATCGAGTTTAATGAGTTC
CTTCAGATGATGTCAAAGAAGATGAGGGGTGCTGACGGTGAGGATGAGCTTAGAGAAGCT
TTTAGAGTGTTCGACAAGAACAACGACGGTCTGATTTCATCGGTGGAGCTGAGACATGTG
ATGACGAACCTTGGGGAGAGGCTGAGTGAGGAAGAAGTCGATGACATGATCCGTGAGGCC
GACCTCGATGGTGACGGCATGGTTAACTACGATGAGTTTGTGACAATATTGACGTCGAAA
AACTAG
Protein sequence:
MAQADRTDDIYNKEYRRIRRITKDLATRQISSEYGLTEEQVAEFKEAFMLFDKDEDGTIT
MAELGVVMRSLGQRPSETELRDMVKEVDQDGNGTIEFNEFLQMMSKKMRGADGEDELREA
FRVFDKNNDGLISSVELRHVMTNLGERLSEEEVDDMIREADLDGDGMVNYDEFVTILTSK
N