| New model in OGS2.0 | DPOGS201113 |
|---|---|
| Genomic Position | scaffold258:- 35334-36689 |
| See gene structure | |
| CDS Length | 525 |
| Paired RNAseq reads | 5099 |
| Single RNAseq reads | 20173 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013680 (3e-79) |
| Best Drosophila hit | CG10664, isoform A (6e-48) |
| Best Human hit | cytochrome c oxidase subunit 4 isoform 1, mitochondrial precursor (9e-30) |
| Best NR hit (blastp) | cytochrome c oxidase polypeptide IV [Bombyx mori] (7e-81) |
| Best NR hit (blastx) | cytochrome c oxidase polypeptide IV [Bombyx mori] (3e-81) |
| GeneOntology terms | GO:0005739 mitochondrion GO:0004129 cytochrome-c oxidase activity GO:0006123 mitochondrial electron transport, cytochrome c to oxygen GO:0005751 mitochondrial respiratory chain complex IV GO:0005811 lipid particle |
| InterPro families | IPR004203 Cytochrome c oxidase subunit IV IPR013288 Cytochrome c oxidase subunit IV, subgroup |
| Orthology group | MCL11433 |
Nucleotide sequence:
ATGGCCAGCCATCTTTTGCGCCGAGCGCTGTTTGATGCTATCCGTGTCCCAGCTGGAACC
CGTGCAGCGAGTGAAATTGCCAAGATCGGCGATCGTGAGTGGGTGGGCTATGGTTTCAAT
GGCCGTCCTAATTACGTAGACAGGAACGATTTCCCCTTACCCGCTGTTAGGTTCAGGGCT
GACACACCCGATGTTAAGGCTCTCCGTGAAAAGGAAAAGGGAGACTGGCGTAAGTTGACC
CTGGAGGAGAAGAAAGCCTTGTACCGAGCTTCATTCTGTCAGACGTTTGCCGAGTTCCAA
GCACCCACCGGGGAGTGGAAGGGAGCGCTCGGCTGGGCGCTTGTTATGGCGTCCATGTCT
TTATGGTTCTACATGGCCATGAAGAAGTTTGTATACAACCCCTTGCCCGAGTCCTTCAGC
GAGGAGTCTCAGAAGGCGCAGCTGAAACGTATGTTGGACTTGAAGGTGAACCCTGTGGAC
GGCCTCTCCTCCAAGTGGGACTACGAGAACAACCGCTGGAAGTAA
Protein sequence:
MASHLLRRALFDAIRVPAGTRAASEIAKIGDREWVGYGFNGRPNYVDRNDFPLPAVRFRA
DTPDVKALREKEKGDWRKLTLEEKKALYRASFCQTFAEFQAPTGEWKGALGWALVMASMS
LWFYMAMKKFVYNPLPESFSEESQKAQLKRMLDLKVNPVDGLSSKWDYENNRWK