| New model in OGS2.0 | DPOGS211596 |
|---|---|
| Genomic Position | scaffold2065:+ 17224-17514 |
| See gene structure | |
| CDS Length | 291 |
| Paired RNAseq reads | 34 |
| Single RNAseq reads | 264 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006245 (1e-46) |
| Best Drosophila hit | CG2021 (3e-39) |
| Best Human hit | N-alpha-acetyltransferase 38, NatC auxiliary subunit (2e-36) |
| Best NR hit (blastp) | GA15189 [Drosophila pseudoobscura pseudoobscura] (1e-38) |
| Best NR hit (blastx) | GA15189 [Drosophila pseudoobscura pseudoobscura] (1e-38) |
| GeneOntology terms | GO:0005688 U6 snRNP GO:0000398 nuclear mRNA splicing, via spliceosome GO:0030532 small nuclear ribonucleoprotein complex GO:0005681 spliceosomal complex GO:0071011 precatalytic spliceosome |
| InterPro families | IPR001163 Like-Sm ribonucleoprotein (LSM) domain IPR006649 Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type IPR010920 Like-Sm ribonucleoprotein (LSM)-related domain |
| Orthology group | MCL13397 |
Nucleotide sequence:
ATGGCTTCAGGTCTAGAAAATTATATTAATCAGACAGTGTCTGTGATAACTGCAGATGGA
AGAAATTTTATAGGCACATTAAAAGGATTCGACCAAACTATAAACATTATATTGGATGAA
TCCCATGAAAGAGTGTTTTCGTCGTCTACAGGAGTAGCACAAGTTGTTCTCGGGCTTCAC
ATTATACGTGGTGACAATATAGCGATCGTCGGACAAATAGACGAGTCTATAGATAGTAGA
TTAGATCTCGGGAACATCAAAGCTGAACCATTGGGACCAATAGTACATTAA
Protein sequence:
MASGLENYINQTVSVITADGRNFIGTLKGFDQTINIILDESHERVFSSSTGVAQVVLGLH
IIRGDNIAIVGQIDESIDSRLDLGNIKAEPLGPIVH