| New model in OGS2.0 | DPOGS205342 |
|---|---|
| Genomic Position | scaffold1150:+ 29014-35093 |
| See gene structure | |
| CDS Length | 984 |
| Paired RNAseq reads | 14 |
| Single RNAseq reads | 84 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011910 (3e-44) |
| Best Drosophila hit | CG5890, isoform A (9e-40) |
| Best Human hit | Kv channel-interacting protein 4 isoform 1 (8e-46) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC004119 [Tribolium castaneum] (3e-72) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC004119 [Tribolium castaneum] (3e-63) |
| GeneOntology terms | GO:0005244 voltage-gated ion channel activity GO:0005515 protein binding GO:0005886 plasma membrane GO:0005509 calcium ion binding GO:0005267 potassium channel activity GO:0006811 ion transport |
| InterPro families | IPR018249 EF-HAND 2 IPR018248 EF-hand IPR018247 EF-Hand 1, calcium-binding site IPR011992 EF-hand-like domain IPR002048 Calcium-binding EF-hand IPR001125 Recoverin |
| Orthology group | MCL10321 |
Nucleotide sequence:
ATGAGTGAGAGAGCCAGTTGCCCTTTCCCTGTCCCCACCCTTTCCTCTTGCTCTCTCGCA
ATCAGAGTCGGCAACGCATCCGCAACATCCCTTATGTTGCAGATGTCCATGGGCGACGAC
GAGGACTGCGAGGACAGTTCATCACACGTGTGGCTCCCTGGGGCTAGATACAGGCCGGAG
CCCCCGGAGACCTTGGCGAGAGCATCACACTTCACGCCGCATGAGATAAAGCTCATGTAC
AGGGGCTTTAAACAGGAGTGTCCCACCGGAGTCCTGGACGAAGAGGCATTCAAGAACATC
TTCTCACAGTTCTTCCCTCTCGGCGACGCGACCCAGTACGCTCACTTCGTCTTCAACGCC
GTGAAACATAAACAGACGGGGAAACTTAATTTTGAGGAATTCCTGGACACTCTATCCCGA
GTGGCTCGAGGCTCCCGTCAGGAGAAATTGTCCTGGATGTTCGCGTTGTACGACGTCGAT
GGTGATGGAAGGATCTCCAGAAGTGAGATGCTGTCTGTAGTACGAGCTGTGTATGAACTG
CTGGGACGAGCTGCTGCGCCTCCAGTGGATAAAGCTGCCGCTGAAGATCACGTAGATAGA
ATATTTCATCTGATGGATACTAACGCGGATGGAGTTGTGACTCCTGACGAGCTAGCTCGC
TGGTGTGCTCGGGACCCCGCCCTGCTCCGCTCTCTGGACACCCTGGATACAGTCTTTGGC
TTGAGTAAAGTTGTGGCCAACATCAAGCCGTCTCCTAAACACGTGGCTGTTCCTGTGAAG
TCACCGGTTCCGACCAGGTCTGGCGGCACCCCGCCGCCCCCTCCTCCCAGGAATATCAGG
AGGCTGGACTCTCTTACGGCTTCTTCACAATCCTCTACGACTCCTCCAGTCCCCACACGG
ACCTCGCACACTGTTAGTATAACAGAAGACAGAGTGGAACAGAAGAGAAAATCCAAGAGA
CGCGTCAGCAGGACAGCTCGATGA
Protein sequence:
MSERASCPFPVPTLSSCSLAIRVGNASATSLMLQMSMGDDEDCEDSSSHVWLPGARYRPE
PPETLARASHFTPHEIKLMYRGFKQECPTGVLDEEAFKNIFSQFFPLGDATQYAHFVFNA
VKHKQTGKLNFEEFLDTLSRVARGSRQEKLSWMFALYDVDGDGRISRSEMLSVVRAVYEL
LGRAAAPPVDKAAAEDHVDRIFHLMDTNADGVVTPDELARWCARDPALLRSLDTLDTVFG
LSKVVANIKPSPKHVAVPVKSPVPTRSGGTPPPPPPRNIRRLDSLTASSQSSTTPPVPTR
TSHTVSITEDRVEQKRKSKRRVSRTAR