| New model in OGS2.0 | DPOGS201998 |
|---|---|
| Genomic Position | scaffold2366:+ 161-6581 |
| See gene structure | |
| CDS Length | 1497 |
| Paired RNAseq reads | 3471 |
| Single RNAseq reads | 7876 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010406 (3e-169) |
| Best Drosophila hit | argonaute 2, isoform B (8e-84) |
| Best Human hit | protein argonaute-3 isoform b (3e-74) |
| Best NR hit (blastp) | argonaute 2 [Bombyx mori] (0.0) |
| Best NR hit (blastx) | argonaute 2 [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0006413 translational initiation GO:0003743 translation initiation factor activity GO:0030422 production of siRNA involved in RNA interference GO:0016442 RNA-induced silencing complex GO:0005515 protein binding GO:0030423 targeting of mRNA for destruction involved in RNA interference GO:0016246 RNA interference GO:0048102 autophagic cell death GO:0035071 salivary gland cell autophagic cell death GO:0035197 siRNA binding GO:0035087 siRNA loading onto RISC involved in RNA interference GO:0035190 syncytial nuclear migration GO:0007349 cellularization GO:0007279 pole cell formation GO:0004521 endoribonuclease activity GO:0035195 gene silencing by miRNA GO:0051607 defense response to virus GO:0033227 dsRNA transport GO:0007367 segment polarity determination GO:0070578 RISC-loading complex GO:0005737 cytoplasm GO:0045071 negative regulation of viral genome replication GO:0070868 heterochromatin organization involved in chromatin silencing |
| InterPro families | IPR012337 Ribonuclease H-like IPR003100 Argonaute/Dicer protein, PAZ IPR003165 Stem cell self-renewal protein Piwi |
| Orthology group | MCL10490 |
Nucleotide sequence:
ATGGAATTACTTCAAGTCTCTTATGGCCAGGCATTAAACAAGCAACTGAATGAAAAACAG
CTACAGACTATGGTACGCGAGGCTGCGACTCCGCCGAATGAGAGATTGAAGAAAATTAAG
GAAGTTATACACAATATGAATTATCCAGCAAATCCAATATTCAAGCATTTTAAATTGGAG
ATTGAGAAGGACTTTTTCAAAGTCGATGCAAAAATATTGCAGGCGCCAAAGTTAGATGTT
GGTGCTGGAAGAGGGGTCGTGCCCAGGAATGGATCGTGGCAGGCTAATCGCTTCTTAAAA
CCCAGCGCATTGGAATCCTGGGGACTCATAGTAGTTGATGCAGATCCAAATGCTTGTAGA
TGCGAAGAGTTCATGCAAAATATAAACCGTATCGGGAAGCAGATGGGGATGACTGTGAAC
GCACCCAAGTATTACAACTTCAATGTTAAGCCTTTTGATTTGAAGAGAACTTTGTATGCT
GCATCTGAAAAGGGTGTCAATTTCTTATTCATCATTGTAGGCGGAAGAGACAAGAATTGC
TATCATAAAGTTAAACAAATAGCGGAGTTGGAGGTCGGATTACTAACGCAATGCATAAAA
GAGTTCACAGCAAAAGCTAAGATGAGCGATCAAACCATACGTAATATACTTTTAAAGGTT
AATTCAAAACTGATGGGCGTGAACCAAGCATTGGACGCGTCATCCATACCGAGGTGCATC
AGTGAAGGCGGTGTTATGTTGGTTGGCGCTGACGTCACTCACCCCTCCCCTGATCAGACC
TCAGTTCCCAGTATTGCAGCCGTCACAGCATCTTTTGACAATTTCTGTTTCAAGTATAAC
ATCGAACTCAGCGTACAGACACCAAAGGCTGAAATTATTGTGGAATTCGAAGACATGATC
TTTGATCACTTGCAAGTCTATAGAAAGAATCAAAGATGCCTTCCAAGGAAGATATATGTG
TTCCGAGATGGCGTGTCGGAGGGACAGTTTGCTCAGGTTATGAACAGTGAATTGGTTGCT
ATTGAAAAGGCCTACCGTCGCCTGGACCAAGAAAGGAAACCGGAAATTCTCTTCCTGTTG
GTACAGAAGAGGCATCATACGAGGTTCTTTTTGGGAGAGCATGATCGTCAGAACGTTGAA
CCTGGTACAGTGGTCGACACAGAAATCGTTCATCGCAGTGAACTTGACTTTTATTTGGTG
TCCCATTCAGCTCTCAAAGGTACAGCTCGTCCTACGAGATACCACGCGGTCGCTAACGAC
GGTGGTCTTCCTTCTGACGAAGTCGAACAGCTGACATATTACTTGTGTCACTTGTACTCC
AGATGCATGAGATCAGTTTCATACCCAACGCCCACATACTACGCTCACCTAGCGTGTCTC
AGAGCTCGATCCCTTACATTCGGCGATCACTTCAACAACAGCGATCTGGAAAAGGAACCG
AAAAGACTTCGCGTCATGGACAAAATGCTAAATTGCAGTCGCATGTTTTTCGTGTAG
Protein sequence:
MELLQVSYGQALNKQLNEKQLQTMVREAATPPNERLKKIKEVIHNMNYPANPIFKHFKLE
IEKDFFKVDAKILQAPKLDVGAGRGVVPRNGSWQANRFLKPSALESWGLIVVDADPNACR
CEEFMQNINRIGKQMGMTVNAPKYYNFNVKPFDLKRTLYAASEKGVNFLFIIVGGRDKNC
YHKVKQIAELEVGLLTQCIKEFTAKAKMSDQTIRNILLKVNSKLMGVNQALDASSIPRCI
SEGGVMLVGADVTHPSPDQTSVPSIAAVTASFDNFCFKYNIELSVQTPKAEIIVEFEDMI
FDHLQVYRKNQRCLPRKIYVFRDGVSEGQFAQVMNSELVAIEKAYRRLDQERKPEILFLL
VQKRHHTRFFLGEHDRQNVEPGTVVDTEIVHRSELDFYLVSHSALKGTARPTRYHAVAND
GGLPSDEVEQLTYYLCHLYSRCMRSVSYPTPTYYAHLACLRARSLTFGDHFNNSDLEKEP
KRLRVMDKMLNCSRMFFV